RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 HOMER3Q9NSC5 361 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ASNSD1Q9NWL6 643 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TRIM10Q9UDY6 481 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TEKT2Q9UIF3 430 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PSME2Q9UL46 239 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TNNQ9UQP3 1299 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TNFSF13BQ9Y275 285 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLEKHA6Q9Y2H5 1048 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HEMK1Q9Y5R4 338 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SIRT4Q9Y6E7 314 aaPredicted RBP4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 UTYO14607 1347 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PTPRCP08575 1304 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MROH5Q6ZUA9 1318 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 WDR19Q8NEZ3 1342 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KIF16BQ96L93 1317 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MYH3P11055 1940 aa4.15□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZMYM2Q9UBW7 1377 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCDC88AQ3V6T2 1871 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LY6G6EA0A0G2JKS1 128 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FAM230AA0A1W2PPH8 454 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 A0A1W2PR77 199 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC22A23A1A5C7 686 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 F8WDY8 70 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 H0Y8G0 127 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PLK4O00444 970 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRYO14603 147 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TTI1O43156 1089 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ST8SIA3O43173 380 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPOPO43791 374 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ERLIN1O75477 346 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DAB1O75553 588 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SCGB2A1O75556 95 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PRDM1O75626 825 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PAHP00439 452 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PCCBP05166 539 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LINGO3P0C6S8 592 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 C8orf89P0DMQ9 161 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PKMP14618 531 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ST6GAL1P15907 406 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF182P17025 639 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 NR1D1P20393 614 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CD72P21854 359 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GALP22466 123 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HNRNPA2B1P22626 353 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ALDH1B1P30837 517 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RDXP35241 583 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IDUAP35475 653 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GNL1P36915 607 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HSF1Q00613 529 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPIBQ01892 262 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ACSM1Q08AH1 577 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LAMB3Q13751 1172 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GIT2Q14161 759 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DRAP1Q14919 205 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CEBPEQ15744 281 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MAPK11Q15759 364 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CDO1Q16878 200 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KLHL26Q53HC5 615 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SOWAHCQ53LP3 525 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RNASEH2BQ5TBB1 312 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ARHGAP17Q68EM7 881 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AWAT2Q6E213 333 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 LRIG3Q6UXM1 1119 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 ZNF793Q6ZN11 406 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DEF8Q6ZN54 512 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SEPT14Q6ZU15 432 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 DET1Q7L5Y6 550 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 IRF2BP2Q7Z5L9 587 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PIP4P1Q86T03 277 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 AMZ2Q86W34 360 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPATA2LQ8IUW3 424 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SIAH3Q8IW03 269 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SERPINA12Q8IW75 414 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CCDC83Q8IWF9 413 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SETD9Q8NE22 299 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SRFBP1Q8NEF9 429 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 OR8K5Q8NH50 307 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 WIPF2Q8TF74 440 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CHURC1Q8WUH1 139 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 PIGKQ92643 395 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KAT2AQ92830 837 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 CELF1Q92879 486 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPSB1Q96BD6 273 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SEPT5Q99719 369 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 WDR83Q9BRX9 315 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 HDHD5Q9BXW7 423 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RNF26Q9BY78 433 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SPATC1LQ9H0A9 340 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 FOXP1Q9H334 677 aaPredicted RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 RMND5AQ9H871 391 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 GDAP2Q9NXN4 497 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 KCNN3Q9UGI6 736 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 BAIAP2L1Q9UHR4 511 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 SLC24A2Q9UI40 661 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MAD2L2Q9UI95 211 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 TSPAN16Q9UKR8 245 aa4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MRPS7Q9Y2R9 242 aaKnown RBP4.14□□□□□ -1.75
PDLIM1P4-201ENST00000504327 MAU2Q9Y6X3 613 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms