RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 RSC1A1Q92681 617 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 KIAA1191Q96A73 305 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 LIN37Q96GY3 246 aaPredicted RBP9.71□□□□□ -0.86
NUP54-203ENST00000504173 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 IL17FQ96PD4 163 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 GFM1Q96RP9 751 aaKnown RBP9.71□□□□□ -0.86
NUP54-203ENST00000504173 NRTNQ99748 197 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 CENPHQ9H3R5 247 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 ALG9Q9H6U8 611 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 HRASLS2Q9NWW9 162 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 ARL15Q9NXU5 204 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 UTP6Q9NYH9 597 aaKnown RBP9.71□□□□□ -0.86
NUP54-203ENST00000504173 OGFRQ9NZT2 677 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 SPATA7Q9P0W8 599 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 LGALS13Q9UHV8 139 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 ATXN7L1Q9ULK2 861 aaPredicted RBP9.71□□□□□ -0.86
NUP54-203ENST00000504173 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.86
NUP54-203ENST00000504173 MAN2B2Q9Y2E5 1009 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 NF1P21359 2839 aa9.71□□□□□ -0.86
NUP54-203ENST00000504173 A0A1W2PPM1 405 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 GSAPA4D1B5 854 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 OR5K3A6NET4 321 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 ZNF839A8K0R7 811 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 FOXO6A8MYZ6 492 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 D6RAR5 112 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 BTN3A3O00478 584 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 CASC3O15234 703 aaKnown RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 CPNE6O95741 557 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 GUCA1CO95843 209 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 SLC16A8O95907 504 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 TPBGLP0DKB5 382 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 COL6A2P12110 1019 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 POU3F2P20265 443 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 CSF2RBP32927 897 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 HSD17B2P37059 387 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 PNLIPRP1P54315 467 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 AP1S2P56377 157 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
NUP54-203ENST00000504173 ARHGAP19Q14CB8 494 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 OR4D1Q15615 310 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 CLPPQ16740 277 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 PPP1R3AQ16821 1122 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 ANKS6Q68DC2 871 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 IRGCQ6NXR0 463 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 MBOAT1Q6ZNC8 495 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 RBM44Q6ZP01 1051 aaKnown RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 HDXQ7Z353 690 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 TAX1BP1Q86VP1 789 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 GPSM1Q86YR5 675 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 PLXDC1Q8IUK5 500 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 CACTIN-AS1Q8N1I8 211 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 C2orf73Q8N5S3 287 aaPredicted RBP9.7□□□□□ -0.86
NUP54-203ENST00000504173 OR2L8Q8NGY9 312 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 STAG3L4Q8TBR4 150 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 EXT2Q93063 718 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 PTERQ96BW5 349 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 ZBTB9Q96C00 473 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 SCYL1Q96KG9 808 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 EGFL8Q99944 293 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 DPYSL5Q9BPU6 564 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 NUDT22Q9BRQ3 303 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 MENTQ9BUN1 341 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 RDH14Q9HBH5 336 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 STARD5Q9NSY2 213 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 OR6C2Q9NZP2 312 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 RNF112Q9ULX5 631 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 OARD1Q9Y530 152 aa9.7□□□□□ -0.86
NUP54-203ENST00000504173 CCDC189A1A4V9 331 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 PIPSLA2A3N6 862 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 GOLGA6L10A6NI86 522 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 C2orf74A8MZ97 194 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 ISM1B1AKI9 464 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 SUPT3HB4E1H0 165 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 HAX1O00165 279 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 MATN2O00339 956 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
NUP54-203ENST00000504173 KERAO60938 352 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 GLRA3O75311 464 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 SUPT3HO75486 399 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 S100BP04271 92 aaPredicted RBP9.69□□□□□ -0.86
NUP54-203ENST00000504173 ANXA5P08758 320 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 CHRM5P08912 532 aaPredicted RBP9.69□□□□□ -0.86
NUP54-203ENST00000504173 RBP1P09455 135 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 MYZAPP0CAP1 466 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 ERGP11308 486 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 KRT4P19013 534 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 GFERP55789 205 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 PCBP4P57723 403 aaKnown RBP9.69□□□□□ -0.86
NUP54-203ENST00000504173 PPP1CAP62136 330 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 SQSTM1Q13501 440 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 TSTA3Q13630 321 aaPredicted RBP9.69□□□□□ -0.86
NUP54-203ENST00000504173 ACAP2Q15057 778 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 TGFBIQ15582 683 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 CYP2A13Q16696 494 aa9.69□□□□□ -0.86
NUP54-203ENST00000504173 HES3Q5TGS1 186 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms