RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	EBLN1	P0CF75	366 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TROVE2	P10155	538 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	9e-6	■□□□□ 8.9
MATR3-231	ENST00000502394	EPB42	P16452	691 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	NPPB	P16860	134 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CCND1	P24385	295 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	EPHA8	P29322	1005 aa	Predicted RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CASP2	P42575	452 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	FASLG	P48023	281 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	INHBC	P55103	352 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	FOXA1	P55317	472 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	BNIP3	Q12983	259 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	GGTA1P	Q4G0N0	100 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	PLA2G2C	Q5R387	149 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SH2D4B	Q5SQS7	431 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	LCTL	Q6UWM7	567 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	GPRIN3	Q6ZVF9	776 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SPATA21	Q7Z572	469 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	WDR75	Q8IWA0	830 aa	Known RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	RBM12B	Q8IXT5	1001 aa	Known RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SYTL1	Q8IYJ3	562 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CLYBL	Q8N0X4	340 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC25A45	Q8N413	288 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CHCHD4	Q8N4Q1	142 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	FAM46D	Q8NEK8	389 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	GPR156	Q8NFN8	814 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	OR4F6	Q8NGB9	312 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	MAPK15	Q8TD08	544 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SETD7	Q8WTS6	366 aa	Known RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SMPDL3A	Q92484	453 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CXorf40B	Q96DE9	158 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	WDR34	Q96EX3	536 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	SIKE1	Q9BRV8	207 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	NPHS2	Q9NP85	383 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	MID1IP1	Q9NPA3	183 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	MARCO	Q9UEW3	520 aa	Predicted RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TRPS1	Q9UHF7	1281 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	LNPEP	Q9UIQ6	1025 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TRAF6	Q9Y4K3	522 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	PCDHGA5	Q9Y5G8	931 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	USH1C	Q9Y6N9	552 aa		11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TDRD6	O60522	2096 aa	Known RBP	11.75	□□□□□ -0.53
MATR3-231	ENST00000502394	TMEM131	Q92545	1883 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	TRBV23OR9-2	A0A075B6M9	112 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	FAM221B	A6H8Z2	402 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	PATE3	B3GLJ2	98 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SLCO1B7	G3V0H7	640 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	NDUFAB1	O14561	156 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	AZIN1	O14977	448 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	HDAC3	O15379	428 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	RRP9	O43818	475 aa	Known RBP	11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	UGDH	O60701	494 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SDC3	O75056	442 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	WFS1	O76024	890 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	OR4F21	O95013	312 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	JUN	P05412	331 aa	Known RBP	11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	ENO1	P06733	434 aa	Known RBP	11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	CD22	P20273	847 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	PEBP1	P30086	187 aa	Known RBP	11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	CCNG1	P51959	295 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	TBCC	Q15814	346 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	RBBP7	Q16576	425 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	PRAMEF13	Q5VWM6	474 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SUSD1	Q6UWL2	747 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	PRR23B	Q6ZRT6	265 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	RNF165	Q6ZSG1	346 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC9B2	Q86UD5	537 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	MED8	Q96G25	268 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	FAR2	Q96K12	515 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	KCNA7	Q96RP8	456 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	MIPEP	Q99797	713 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	NUSAP1	Q9BXS6	441 aa	Known RBP	11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	XKR8	Q9H6D3	395 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	UCK1	Q9HA47	277 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	FSCN3	Q9NQT6	498 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	KCNK4	Q9NYG8	393 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	OR6C2	Q9NZP2	312 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	VTI1B	Q9UEU0	232 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC6A14	Q9UN76	642 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	SH2B3	Q9UQQ2	575 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	ANGPTL3	Q9Y5C1	460 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394		R4GN57	208 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394	GPR179	Q6PRD1	2367 aa		11.74	□□□□□ -0.53
MATR3-231	ENST00000502394		B4DGG1	531 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394		E7EQ34	232 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	YKT6	O15498	198 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	KDM1A	O60341	852 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	DFNA5	O60443	496 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	VIP	P01282	170 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	ANXA6	P08133	673 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	KIT	P10721	976 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	UROS	P10746	265 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SHMT2	P34897	504 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	ARRB1	P49407	418 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	MAZ	P56270	477 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	TUBB3	Q13509	450 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	GPR18	Q14330	331 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	KRT33B	Q14525	404 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	DEFB133	Q30KQ1	61 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms