RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZGLP1P0C6A0 271 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 PRR35P0CG20 571 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 COX6A1P12074 109 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 MST1P26927 711 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 PSMB5P28074 263 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 HTR1EP28566 365 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
TRAF4-212ENST00000498540 CARSP49589 748 aaKnown RBP14.03□□□□□ -0.16
TRAF4-212ENST00000498540 HSPA14Q0VDF9 509 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 SF1Q15637 639 aaKnown RBP14.03□□□□□ -0.16
TRAF4-212ENST00000498540 INAQ16352 499 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 CCDC38Q502W7 563 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 WASHC2DQ5SRD0 308 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 FRMPD2BQ6IN97 320 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 AADACL2Q6P093 401 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 MRGPRGQ86SM5 289 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 DCUN1D3Q8IWE4 304 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 KBTBD2Q8IY47 623 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 SIRT6Q8N6T7 355 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 MIEF2Q96C03 454 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 LRRC40Q9H9A6 602 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 ZNF304Q9HCX3 659 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 IL1RAPL1Q9NZN1 696 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 STOX2Q9P2F5 926 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-212ENST00000498540 SUCOQ9UBS9 1254 aaKnown RBP14.03□□□□□ -0.16
TRAF4-212ENST00000498540 C3orf18Q9UK00 162 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 EFR3BQ9Y2G0 817 aa14.03□□□□□ -0.16
TRAF4-212ENST00000498540 PCNX1Q96RV3 2341 aa14.02□□□□□ -0.16
TRAF4-212ENST00000498540 LOC105369274A0A096LPK9 316 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 NSG1A0A0A6YYJ2 146 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 LOC102723532A0A0G2JNH3 316 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 HYKKA2RU49 373 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 KRT87PA6NCN2 255 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 CCL21O00585 134 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 RASGRF2O14827 1237 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 PRICKLE3O43900 615 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-212ENST00000498540 UNC5CO95185 931 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 CELA2AP08217 269 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 PTPN7P35236 360 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 MAGEA1P43355 309 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 OCA2Q04671 838 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF630Q2M218 657 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-212ENST00000498540 PARP6Q2NL67 630 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 FAM214AQ32MH5 1076 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 VWA2Q5GFL6 755 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 TMEM207Q6UWW9 146 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 LAPTM4BQ86VI4 370 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 OR4N4Q8N0Y3 316 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF808Q8N4W9 903 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-212ENST00000498540 AMER2Q8N7J2 671 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 OR13J1Q8NGT2 312 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 HAS2Q92819 552 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 ALS2CR12Q96Q35 445 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 TRIM8Q9BZR9 551 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 IGSF5Q9NSI5 407 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF282Q9UDV7 671 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-212ENST00000498540 SH3BGRL2Q9UJC5 107 aa14.02□□□□□ -0.17
TRAF4-212ENST00000498540 SETD2Q9BYW2 2564 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-212ENST00000498540 IQCF5A8MTL0 148 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 FFAR3O14843 346 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 GPR42O15529 346 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 CBFA2T2O43439 604 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 GPC4O75487 556 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 RPN2P04844 631 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 COX6B1P14854 86 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 CA7P43166 264 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 EEF1A2Q05639 463 aaKnown RBP14.01□□□□□ -0.17
TRAF4-212ENST00000498540 SEMA3AQ14563 771 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 CNSTQ6PJW8 725 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 UNC5DQ6UXZ4 953 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 NDUFAF7Q7L592 441 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 TAB3Q8N5C8 712 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-212ENST00000498540 FAM71DQ8N9W8 422 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 C10orf90Q96M02 699 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 MIPEPQ99797 713 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 CHST11Q9NPF2 352 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 ABI3Q9P2A4 366 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 SLC2A6Q9UGQ3 507 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 ZC3H7BQ9UGR2 993 aaKnown RBP14.01□□□□□ -0.17
TRAF4-212ENST00000498540 ITGB1BP2Q9UKP3 347 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 SLC39A10Q9ULF5 831 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 PCDHA3Q9Y5H8 950 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 FAM169AQ9Y6X4 670 aa14.01□□□□□ -0.17
TRAF4-212ENST00000498540 NCOA6Q14686 2063 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-212ENST00000498540 IGLV3-12A0A075B6K2 115 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 A0A0J9YVX5 310 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 TARM1B6A8C7 271 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 SRPX2O60687 465 aaPredicted RBP14□□□□□ -0.17
TRAF4-212ENST00000498540 WISP2O76076 250 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 WDPCPO95876 746 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 GOT2P00505 430 aaKnown RBP14□□□□□ -0.17
TRAF4-212ENST00000498540 EIF2S1P05198 315 aaKnown RBP14□□□□□ -0.17
TRAF4-212ENST00000498540 SERPINA7P05543 415 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 FBLP22087 321 aaKnown RBP14□□□□□ -0.17
TRAF4-212ENST00000498540 GDF10P55107 478 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 CCSMST1Q4G0I0 132 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 FAAH2Q6GMR7 532 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms