RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 HHLA1C9JL84 531 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CLDN4O14493 209 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CLIC2O15247 247 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 RNASEH1O60930 286 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 CSN3P07498 182 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 FRMD6-AS1P0C7T7 363 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ERVK-10P10266 1014 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 LIFP15018 202 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 TCF4P15884 667 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 GNB3P16520 340 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 IFNAR1P17181 557 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 SP100P23497 879 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 EEF1B2P24534 225 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 MNDAP41218 407 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 PRKCIP41743 596 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ASCL1P50553 236 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 LUMP51884 338 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 IRX1P78414 480 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 CUL3Q13618 768 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ITGA7Q13683 1181 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 VEZF1Q14119 521 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 UGT3A2Q3SY77 523 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 MCMDC2Q4G0Z9 681 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CCNYL2Q5T2Q4 361 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 SFMBT2Q5VUG0 894 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 C11orf63Q6NUN7 778 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CAVIN1Q6NZI2 390 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 SLC27A1Q6PCB7 646 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 DCLRE1AQ6PJP8 1040 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 RBMS3Q6XE24 437 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 ERN2Q76MJ5 926 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 GALNTL5Q7Z4T8 443 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ADCK2Q7Z695 626 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 DNAJB7Q7Z6W7 309 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 TRPT1Q86TN4 253 aaKnown RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 ISCA2Q86U28 154 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 TLK2Q86UE8 772 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 RTN4RL2Q86UN3 420 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 P2RY8Q86VZ1 359 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 FAM219AQ8IW50 185 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 THNSL1Q8IYQ7 743 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 MAML2Q8IZL2 1156 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 CDK20Q8IZL9 346 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 EID3Q8N140 333 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 MAPKAPK5-AS1Q8N8E1 139 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 BMPERQ8N8U9 685 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ZNF383Q8NA42 475 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 IQUBQ8NA54 791 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 THAP8Q8NA92 274 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 VANGL1Q8TAA9 524 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 CCDC107Q8WV48 283 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 PIGBQ92521 554 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 EXT2Q93063 718 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 TMEM143Q96AN5 459 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 NSL1Q96IY1 281 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 FAM20AQ96MK3 541 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 FNBP1Q96RU3 617 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 RAD9AQ99638 391 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CCDC3Q9BQI4 270 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 MGME1Q9BQP7 344 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 SLC2A11Q9BYW1 496 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 EDEM3Q9BZQ6 932 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 CDH20Q9HBT6 801 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 DNAJC4Q9NNZ3 241 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 SH3GLB2Q9NR46 395 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 SDR39U1Q9NRG7 319 aaPredicted RBP2.16□□□□□ -2.06
RBM39-242ENST00000498280 ECHDC1Q9NTX5 307 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 MRGBPQ9NV56 204 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 POLLQ9UGP5 575 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 ZDHHC2Q9UIJ5 367 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 WDR83OSQ9Y284 106 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 PRSS21Q9Y6M0 314 aa2.16□□□□□ -2.06
RBM39-242ENST00000498280 A0A1W2PRQ8 180 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 ANKRD61A6NGH8 418 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 ENO4A6NNW6 628 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 ZNF197O14709 1029 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 TBCAO75347 108 aaKnown RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 PRKRAO75569 313 aaKnown RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 SORBS2O94875 1100 aaKnown RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 PIGNO95427 931 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 CAVIN2O95810 425 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 GSRP00390 522 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 NGFP01138 241 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 INHBAP08476 426 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 PRSS56P0CW18 603 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 PDGFRAP16234 1089 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 ZNF26P17031 533 aaPredicted RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 EFNA1P20827 205 aaPredicted RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 CD27P26842 260 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 GP5P40197 560 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 CRKLP46109 303 aaKnown RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 GSDMDP57764 484 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 TFCP2Q12800 502 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 TAF10Q12962 218 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 SQLEQ14534 574 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 P2RY6Q15077 328 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 ZNF239Q16600 458 aaKnown RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 ODF4Q2M2E3 257 aa2.15□□□□□ -2.07
RBM39-242ENST00000498280 LBHQ53QV2 105 aaPredicted RBP2.15□□□□□ -2.07
RBM39-242ENST00000498280 XKR3Q5GH77 459 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms