RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 WIPF3A6NGB9 483 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 E7EVH7 732 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 AGPSO00116 658 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 RASGRF2O14827 1237 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 CLDN1O95832 211 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 S1PR4O95977 384 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 COL8A1P27658 744 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 BDKRB1P46663 353 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 YBX1P67809 324 aaKnown RBP17.76■□□□□ 0.43
PRKCB-209ENST00000498058 UNC5DQ6UXZ4 953 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 Q6ZS92 163 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 SHISA6Q6ZSJ9 500 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 ZNF572Q7Z3I7 529 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-209ENST00000498058 SPNS2Q8IVW8 549 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 IQCKQ8N0W5 287 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 METTL27Q8N6F8 245 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-209ENST00000498058 DENND1AQ8TEH3 1009 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 BARD1Q99728 777 aaKnown RBP17.76■□□□□ 0.43
PRKCB-209ENST00000498058 SLC29A3Q9BZD2 475 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 ATP13A2Q9NQ11 1180 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 TREX1Q9NSU2 369 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 CUTCQ9NTM9 273 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 CATSPERZQ9NTU4 200 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.76■□□□□ 0.43
PRKCB-209ENST00000498058 FBXL4Q9UKA2 621 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 HS3ST3B1Q9Y662 390 aa17.76■□□□□ 0.43
PRKCB-209ENST00000498058 DOPEY1Q5JWR5 2465 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CTAGE15A4D2H0 777 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 PRMT5O14744 637 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-209ENST00000498058 DSCR3O14972 297 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CD3EAPO15446 510 aaKnown RBP17.75■□□□□ 0.43
PRKCB-209ENST00000498058 GAS8O95995 478 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 APOA4P06727 396 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 APRTP07741 180 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CD63P08962 238 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CTAGE8P0CG41 777 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 MMP11P24347 488 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 ARNTP27540 789 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 NMBRP28336 390 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 OR1D4P47884 311 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-209ENST00000498058 SF1Q15637 639 aaKnown RBP17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CYP2A13Q16696 494 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 KIRREL2Q6UWL6 708 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 GSTA5Q7RTV2 222 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CTAGE6Q86UF2 777 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CTAGE4Q8IX94 777 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 FKBP10Q96AY3 582 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 TTC1Q99614 292 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 ENAMQ9NRM1 1142 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 STOX2Q9P2F5 926 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-209ENST00000498058 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 PCDHGA10Q9Y5H3 936 aa17.75■□□□□ 0.43
PRKCB-209ENST00000498058 A0A1W2PPV9 198 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 KDM1AO60341 852 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 C1orf105O95561 183 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 LDLRP01130 860 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 COILP38432 576 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-209ENST00000498058 ARSFP54793 590 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 Q0VFX4 171 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 HIF1AQ16665 826 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 PCID2Q5JVF3 399 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 CTSL3PQ5NE16 218 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 FRMPD2BQ6IN97 320 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
PRKCB-209ENST00000498058 NLRP9Q7RTR0 991 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 CCDC89Q8N998 374 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 PPHLN1Q8NEY8 458 aaKnown RBP17.74■□□□□ 0.43
PRKCB-209ENST00000498058 DLG3Q92796 817 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 PEX13Q92968 403 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 ILKAPQ9H0C8 392 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-209ENST00000498058 SLC26A1Q9H2B4 701 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 SOX17Q9H6I2 414 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-209ENST00000498058 SYNPO2LQ9H987 977 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 MAU2Q9Y6X3 613 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 POLEQ07864 2286 aa17.74■□□□□ 0.43
PRKCB-209ENST00000498058 LOC105369274A0A096LPK9 316 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 LOC102723532A0A0G2JNH3 316 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 FITM1A5D6W6 292 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 VSTM2BA6NLU5 285 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 IGHEP01854 428 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 ALBP02768 609 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 ALPPP05187 535 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 ITGA3P26006 1051 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 VARSP26640 1264 aaKnown RBP17.73■□□□□ 0.43
PRKCB-209ENST00000498058 GLRBP48167 497 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 AIMP2Q13155 320 aaKnown RBP17.73■□□□□ 0.43
PRKCB-209ENST00000498058 FASTKQ14296 549 aaKnown RBP17.73■□□□□ 0.43
PRKCB-209ENST00000498058 PRAMEF13Q5VWM6 474 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 PTRHD1Q6GMV3 140 aaKnown RBP17.73■□□□□ 0.43
PRKCB-209ENST00000498058 CES3Q6UWW8 571 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 OR4N4Q8N0Y3 316 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 ZADH2Q8N4Q0 377 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 OR2A1Q8NGT9 310 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 SLC22A18Q96BI1 424 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 MIPEPQ99797 713 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 SELENOSQ9BQE4 189 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 WDR54Q9H977 334 aa17.73■□□□□ 0.43
PRKCB-209ENST00000498058 L2HGDHQ9H9P8 463 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms