RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 WFS1O76024 890 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 AP2A1O95782 977 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 PRSS56P0CW18 603 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 ITGAMP11215 1152 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 PECAM1P16284 738 aaPredicted RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 IGFBP2P18065 325 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 RAB28P51157 221 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 OCA2Q04671 838 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 EEF1A2Q05639 463 aaKnown RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 OLIG2Q13516 323 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 FAM214AQ32MH5 1076 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 RIPOR1Q6ZS17 1223 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 TGIF2LYQ8IUE0 185 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 TMTC1Q8IUR5 882 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 TTC29Q8NA56 475 aaPredicted RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 SUN3Q8TAQ9 357 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 TRIM44Q96DX7 344 aaPredicted RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 MENTQ9BUN1 341 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 FICDQ9BVA6 458 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 CXXC4Q9H2H0 198 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 GSX1Q9H4S2 264 aaPredicted RBP15.69■□□□□ 0.1
VIM-208ENST00000497849 UVRAGQ9P2Y5 699 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 TFR2Q9UP52 801 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 AKAP6Q13023 2319 aa15.69■□□□□ 0.1
VIM-208ENST00000497849 FLNAP21333 2647 aaKnown RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 IGLV3-12A0A075B6K2 115 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 BHMG1C9JSJ3 638 aaPredicted RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 LIN7AO14910 233 aaPredicted RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 ZNHIT1O43257 154 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 UQCRHP07919 91 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 DRD2P14416 443 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 ACRV1P26436 265 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 PKLRP30613 574 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 DNAJA1P31689 397 aaKnown RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 ZNF140P52738 457 aaPredicted RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 IST1P53990 364 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 GPR33Q49SQ1 333 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 KRTCAP3Q53RY4 240 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 ZC3H12BQ5HYM0 836 aaKnown RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 RANBP10Q6VN20 620 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 NAPRTQ6XQN6 538 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 SERPINA9Q86WD7 417 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 PHF10Q8WUB8 498 aaKnown RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 NRGNQ92686 78 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 SELENOSQ9BQE4 189 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 APOL2Q9BQE5 337 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 TSPAN10Q9H1Z9 355 aaPredicted RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 EPN1Q9Y6I3 576 aaPredicted RBP15.68■□□□□ 0.1
VIM-208ENST00000497849 PRSS21Q9Y6M0 314 aa15.68■□□□□ 0.1
VIM-208ENST00000497849 SCN2AQ99250 2005 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 HYKKA2RU49 373 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 FAM227AF5H4B4 570 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 ADAM10O14672 748 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 CTSVO60911 334 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 ZRANB2O95218 330 aaKnown RBP eCLIP15.67■□□□□ 0.1
VIM-208ENST00000497849 KRT1P04264 644 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 GSTM1P09488 218 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 KLK2P20151 261 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 MC4RP32245 332 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 ADRA1AP35348 466 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 NR2C2P49116 596 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 GSTM4Q03013 218 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 MESDQ14696 234 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 BRD3Q15059 726 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 ZNF766Q5HY98 468 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 WASHC2DQ5SRD0 308 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 FIGLAQ6QHK4 219 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 LRRC8AQ8IWT6 810 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 CHERPQ8IWX8 916 aaKnown RBP15.67■□□□□ 0.1
VIM-208ENST00000497849 C2orf73Q8N5S3 287 aaPredicted RBP15.67■□□□□ 0.1
VIM-208ENST00000497849 AGAP11Q8TF27 550 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 CA5BP1Q8WTZ4 195 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 SDCCAG3Q96C92 435 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 DMRTA2Q96SC8 542 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 VAT1Q99536 393 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 LUC7LQ9NQ29 371 aaKnown RBP15.67■□□□□ 0.1
VIM-208ENST00000497849 RIC8BQ9NVN3 520 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 STMN3Q9NZ72 180 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 RSPH14Q9UHP6 348 aa15.67■□□□□ 0.1
VIM-208ENST00000497849 REXO2Q9Y3B8 237 aaKnown RBP15.67■□□□□ 0.1
VIM-208ENST00000497849 VPS13CQ709C8 3753 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 SLC5A10A0PJK1 596 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 IDSB3KWA1 339 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 H2AFZP0C0S5 128 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 MYBL2P10244 700 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 CXCR2P25025 360 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 CYLC1P35663 651 aaPredicted RBP15.66■□□□□ 0.1
VIM-208ENST00000497849 ARHGAP25P42331 645 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 MAGEA1P43355 309 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 EMP2P54851 167 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 VSX2P58304 361 aaPredicted RBP15.66■□□□□ 0.1
VIM-208ENST00000497849 ZNF33BQ06732 778 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 PCOLCEQ15113 449 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 ABHD17BQ5VST6 288 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 FRMPD2BQ6IN97 320 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 PRMT9Q6P2P2 845 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 MFSD7Q6UXD7 560 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 C3P1Q6ZMU1 363 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 NEK10Q6ZWH5 1172 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms