RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 HIC2Q96JB3 615 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 ZNF317Q96PQ6 595 aaPredicted RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 PLEKHG4BQ96PX9 1271 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 EGFL8Q99944 293 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MRPL57Q9BQC6 102 aaKnown RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 ZSCAN5AQ9BUG6 496 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 GATA5Q9BWX5 397 aaPredicted RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 LGR4Q9BXB1 951 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 SLC17A9Q9BYT1 436 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 TGIF2Q9GZN2 237 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 C20orf27Q9GZN8 174 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MRPL46Q9H2W6 279 aaKnown RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 TBC1D17Q9HA65 648 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MRPL40Q9NQ50 206 aaKnown RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 TRPV5Q9NQA5 729 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 SLC2A4RGQ9NR83 387 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 TM7SF3Q9NS93 570 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 PSD3Q9NYI0 1048 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 NCKIPSDQ9NZQ3 722 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 THEGQ9P2T0 379 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 ATXN10Q9UBB4 475 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 ZNHIT2Q9UHR6 403 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MMP17Q9ULZ9 603 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 DUSP12Q9UNI6 340 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 PSMD13Q9UNM6 376 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 ZFR2Q9UPR6 939 aaKnown RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 SORCS3Q9UPU3 1222 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 MYRFQ9Y2G1 1151 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 PCDHB1Q9Y5F3 818 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 F5P12259 2224 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 DOCK9Q9BZ29 2069 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 COL4A2P08572 1712 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 PLXNB3Q9ULL4 1909 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 NUMA1Q14980 2115 aa4.66□□□□□ -1.66
CMSS1-209ENST00000497345 LAMA2P24043 3122 aaKnown RBP4.66□□□□□ -1.66
CMSS1-209ENST00000497345 GOLGA8QA0A0J9YX86 632 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 KANSL1LA0AUZ9 987 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 RGSL1A5PLK6 1076 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 GOLGA8OA6NCC3 632 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 PABPN1LA6NDY0 278 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 A8MT66 165 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TMEM233B4DJY2 109 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ANKRD65E5RJM6 399 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 GOLGA8NF8WBI6 632 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 PSMD11O00231 422 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 NPC1O15118 1278 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 BIRC5O15392 142 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 LATO43561 262 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 MAGEC1O60732 1142 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 EDF1O60869 148 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 KATNA1O75449 491 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 CRCPO75575 148 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 POP7O75817 140 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SUPT7LO94864 414 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SOD1P00441 154 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 PDGFBP01127 241 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 FTH1P02794 183 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 APOA4P06727 396 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TPBGLP0DKB5 382 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TROVE2P10155 538 aaKnown RBP eCLIP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 COL6A2P12110 1019 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 GLULP15104 373 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 DGKAP23743 735 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ATP5F1P24539 256 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 EEF1DP29692 281 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 PDHA2P29803 388 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 HOXC12P31275 282 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ARRB2P32121 409 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SKIV2L2P42285 1042 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 BDKRB1P46663 353 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 GNPDA1P46926 289 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 RGS4P49798 205 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SUOXP51687 545 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SLC18A1P54219 525 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 AQP5P55064 265 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ATP6V0D1P61421 351 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 RPL11P62913 178 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 RPS21P63220 83 aaKnown RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ZBTB16Q05516 673 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 CCDC15Q0P6D6 951 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 IFT88Q13099 833 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 LRRC32Q14392 662 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ITIH4Q14624 930 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 PUM1Q14671 1186 aaKnown RBP eCLIP4.65□□□□□ -1.672e-11■■■■□ 20.1
CMSS1-209ENST00000497345 ACAP2Q15057 778 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 E2F5Q15329 346 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TTLL9Q3SXZ7 439 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TUBB8Q3ZCM7 444 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 FBXO43Q4G163 708 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 SGO1Q5FBB7 561 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 ARL13AQ5H913 290 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 LDLRAP1Q5SW96 308 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 VWA5B1Q5TIE3 1220 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 LIPMQ5VYY2 423 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 TSSK4Q6SA08 328 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 MACC1Q6ZN28 852 aa4.65□□□□□ -1.67
CMSS1-209ENST00000497345 UBE2R2Q712K3 238 aaPredicted RBP4.65□□□□□ -1.67
CMSS1-209ENST00000497345 CEP68Q76N32 757 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms