RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 DPP3Q9NY33 737 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TRUB2O95900 331 aaKnown RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 DANCRP0C864 163 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 CSH1P0DML2 217 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 CSH2P0DML3 217 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 DNASE1P24855 282 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 STAT2P52630 851 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 TMEM50BP56557 158 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 GUCY2DQ02846 1103 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 PAX8Q06710 450 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 UGT3A2Q3SY77 523 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SLC35D3Q5M8T2 416 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 ZNF595Q8IYB9 648 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 LINC00612Q8N6U2 182 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 THAP8Q8NA92 274 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 OR2L2Q8NH16 312 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 APOBEC4Q8WW27 367 aaKnown RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SLAMF9Q96A28 289 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SKA1Q96BD8 255 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SPACA9Q96E40 222 aaPredicted RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SPDL1Q96EA4 605 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 ZNF414Q96IQ9 312 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 FAM20AQ96MK3 541 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 SFXN2Q96NB2 322 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 NKX3-1Q99801 234 aaPredicted RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 RAB11FIP5Q9BXF6 653 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
VPS26A-208ENST00000497022 FAM120CQ9NX05 1096 aaKnown RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 FBXO2Q9UK22 296 aaPredicted RBP2.69□□□□□ -1.98
VPS26A-208ENST00000497022 FSD2A1L4K1 749 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 ENTPD3O75355 529 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 GJB3O75712 270 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 TSPAN9O75954 239 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 IGHV3-13P01766 116 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 IGHV2-70P01814 119 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 IGHEP01854 428 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 SAT1P21673 171 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 PAX3P23760 479 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 HLA-FP30511 346 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 PSMC6P62333 389 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 EPS8Q12929 822 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 MTF1Q14872 753 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 EFTUD2Q15029 972 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 ZNF74Q16587 644 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 MTHFSDQ2M296 383 aaKnown RBP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 FAM205BPQ63HN1 556 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 KIF6Q6ZMV9 814 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 ARHGAP22Q7Z5H3 698 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 MINDY1Q8N5J2 469 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 OR10S1Q8NGN2 331 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 SYN2Q92777 582 aaPredicted RBP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 ZNF622Q969S3 477 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 SLC22A18Q96BI1 424 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 NSUN4Q96CB9 384 aaKnown RBP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 EVI5LQ96CN4 794 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 AGAP4Q96P64 663 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 NAP1L4Q99733 375 aaKnown RBP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 MED20Q9H944 212 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 GIMAP4Q9NUV9 329 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 TEX10Q9NXF1 929 aaPredicted RBP2.68□□□□□ -1.98
VPS26A-208ENST00000497022 STK26Q9P289 416 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 MAN1B1Q9UKM7 699 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 TP53TG3Q9ULZ0 132 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 PADI2Q9Y2J8 665 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 CSNK1G3Q9Y6M4 447 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 FER1L5A0AVI2 2057 aa2.68□□□□□ -1.98
VPS26A-208ENST00000497022 NEMP2A6NFY4 417 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 HAPLN1P10915 354 aaPredicted RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 MPZP25189 248 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 MATR3P43243 847 aaKnown RBP eCLIP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 TSFMP43897 325 aaKnown RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 LBX1P52954 281 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 NAP1L1P55209 391 aaKnown RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 HNRNPKP61978 463 aaKnown RBP eCLIP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 CHAF1BQ13112 559 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 NTRK2Q16620 822 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 CBWD6Q4V339 395 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 CBWD3Q5JTY5 395 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 FRRS1Q6ZNA5 592 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 CATSPERDQ86XM0 798 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 LINC00346Q8IVM7 164 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 FBXL16Q8N461 479 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 AQP11Q8NBQ7 271 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 C17orf47Q8NEP4 570 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 MIPOL1Q8TD10 442 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 PIGBQ92521 554 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 THOC1Q96FV9 657 aaKnown RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 SPAG5Q96R06 1193 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 GAL3ST4Q96RP7 486 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 BARD1Q99728 777 aaKnown RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 SDF4Q9BRK5 362 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 BLOC1S4Q9NUP1 217 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 NDE1Q9NXR1 346 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 CRNNQ9UBG3 495 aaPredicted RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 ADD3Q9UEY8 706 aaKnown RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 C19orf25Q9UFG5 118 aaPredicted RBP2.67□□□□□ -1.98
VPS26A-208ENST00000497022 TBC1D29Q9UFV1 150 aa2.67□□□□□ -1.98
VPS26A-208ENST00000497022 VPS28Q9UK41 221 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms