RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 ZNF689Q96CS4 500 aaPredicted RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 MOCOSQ96EN8 888 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 BPIFA3Q9BQP9 254 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 MCRIP2Q9BUT9 160 aaKnown RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 ABHD6Q9BV23 337 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 UPF3BQ9BZI7 483 aaKnown RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 TNMDQ9H2S6 317 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 CLSTN2Q9H4D0 955 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 ACKR4Q9NPB9 350 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 SEPT11Q9NVA2 429 aaKnown RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 DBF4Q9UBU7 674 aaPredicted RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 PRDM4Q9UKN5 801 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 MRPS28Q9Y2Q9 187 aaKnown RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 PCDHGA5Q9Y5G8 931 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 SPIN1Q9Y657 262 aaPredicted RBP3.72□□□□□ -1.81
TRIM4-205ENST00000496896 HEG1Q9ULI3 1381 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 MED23Q9ULK4 1368 aa3.72□□□□□ -1.81
TRIM4-205ENST00000496896 SIPA1L3O60292 1781 aaPredicted RBP3.71□□□□□ -1.81
TRIM4-205ENST00000496896 LTN1O94822 1766 aa3.71□□□□□ -1.81
TRIM4-205ENST00000496896 LRRC72A6NJI9 287 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 FIBPO43427 364 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ATP8B1O43520 1251 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 BAIAP3O94812 1187 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TPM1P09493 284 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 CLTBP09497 229 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 MAPK4P31152 587 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF75DP51815 510 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ARF3P61204 181 aaPredicted RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ARF1P84077 181 aaKnown RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 PPP2R2BQ00005 443 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 GPR17Q13304 367 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 NR1D2Q14995 579 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TAF13Q15543 124 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 SLC1A5Q15758 541 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 LPAL2Q16609 132 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 STX1AQ16623 288 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 PSRC1Q6PGN9 363 aaPredicted RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 BLOC1S2Q6QNY1 142 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 METTL7BQ6UX53 244 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 G2E3Q7L622 706 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 GTSCR1Q86UQ5 136 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 LSMEM2Q8N112 164 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF383Q8NA42 475 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 CCDC112Q8NEF3 446 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 OR1J1Q8NGS3 322 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ERO1AQ96HE7 468 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 JAKMIP1Q96N16 626 aaKnown RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF396Q96N95 335 aaPredicted RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 PYGO2Q9BRQ0 406 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TRIM51Q9BSJ1 452 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 RTN4RQ9BZR6 473 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TSPYL1Q9H0U9 437 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 EIF2B3Q9NR50 452 aaKnown RBP3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ANO10Q9NW15 660 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 TMEM94Q12767 1356 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ABCC12Q96J65 1359 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 MYH15Q9Y2K3 1946 aa3.71□□□□□ -1.82
TRIM4-205ENST00000496896 ITIH6Q6UXX5 1313 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 MAP3K15Q6ZN16 1313 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 NFAT5O94916 1531 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 A0A0J9YWU9 116 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 PRSS51A0A1B0GVH4 220 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 LNP1A1A4G5 178 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 VPS37CA5D8V6 355 aaPredicted RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SSX4O60224 188 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 KINO60870 393 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 PRKRAO75569 313 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 NGFP01138 241 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 RAF1P04049 648 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 HMBSP08397 361 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ACP2P11117 423 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 DPEP1P16444 411 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SLC6A6P31641 620 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 GARSP41250 739 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CDH11P55287 796 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 TEFQ10587 303 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 PLA2G7Q13093 441 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ZSCAN25Q6NSZ9 544 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF613Q6PF04 617 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CORO6Q6QEF8 472 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CWC27Q6UX04 472 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CCDC73Q6ZRK6 1079 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SLC16A9Q7RTY1 509 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 UNC5CLQ8IV45 518 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CCDC83Q8IWF9 413 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF440Q8IYI8 595 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CEP57L1Q8IYX8 460 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 KRT222Q8N1A0 295 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 LYG1Q8N1E2 194 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 MARVELD2Q8N4S9 558 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 TTC39CQ8N584 583 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF614Q8N883 585 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ANKRD52Q8NB46 1076 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 C1orf131Q8NDD1 294 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF397Q8NF99 534 aaPredicted RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 MOSPD2Q8NHP6 518 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 KIF18AQ8NI77 898 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 GRHL3Q8TE85 626 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ERLEC1Q96DZ1 483 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms