RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NLRP9Q7RTR0 991 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 CD163Q86VB7 1156 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 CCDC71Q8IV32 467 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 SLC30A5Q8TAD4 765 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 NELFBQ8WX92 580 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 SMARCE1Q969G3 411 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 VPS35Q96QK1 796 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 TRIM51Q9BSJ1 452 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM60AQ9NP50 221 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 KLHL1Q9NR64 748 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 RIC8BQ9NVN3 520 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 BEX4Q9NWD9 120 aaPredicted RBP9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 POLG2Q9UHN1 485 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 CTNND2Q9UQB3 1225 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 HEBP2Q9Y5Z4 205 aa9.16□□□□□ -0.94
SMARCAL1-213ENST00000496037 ASPDHA6ND91 283 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 OR2AG2A6NM03 316 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 A6NNC1 897 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 USP27XA6NNY8 438 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 BTN3A3O00478 584 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 HCRTR1O43613 425 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 MAFKO60675 156 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 COX6A1P12074 109 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZNF24P17028 368 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 CES1P23141 567 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 PEX19P40855 299 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 NSFP46459 744 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 GSCP56915 257 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 DCAF7P61962 342 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 KRT85P78386 507 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 DSC2Q02487 901 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 OCA2Q04671 838 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 EEF1A2Q05639 463 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 MPP2Q14168 576 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 CAMK4Q16566 473 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 CA9Q16790 459 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 MINDY4Q4G0A6 757 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 METRNLQ641Q3 311 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 TXNRD3NBQ6F5E7 133 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 DNAJC24Q6P3W2 148 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 SPESP1Q6UW49 350 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 COX15Q7KZN9 410 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 P3H2Q8IVL5 708 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 SIAH3Q8IW03 269 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 TMEM178AQ8NBL3 297 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 FAM57AQ8TBR7 257 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 GTPBP3Q969Y2 492 aaKnown RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 MCEEQ96PE7 176 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 BDH2Q9BUT1 245 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ADGRE3Q9BY15 652 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 VPS16Q9H269 839 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 TP63Q9H3D4 680 aaPredicted RBP9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ZWILCHQ9H900 591 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 SIX2Q9NPC8 291 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 DMRT3Q9NQL9 472 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ADAM22Q9P0K1 906 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 C3orf18Q9UK00 162 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ACSL5Q9ULC5 683 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 ASB1Q9Y576 335 aa9.15□□□□□ -0.94
SMARCAL1-213ENST00000496037 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 ANKRD12Q6UB98 2062 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 SIGLEC16A6NMB1 481 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 B2RBV5 119 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 ANKRD66B4E2M5 251 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 TGFBR3LH3BV60 316 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 RASGRF2O14827 1237 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 PRPSAP2O60256 369 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 PRLP01236 227 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CYP1A1P04798 512 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CALB1P05937 261 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CTSBP07858 339 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CELA2AP08217 269 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CXCR2P25025 360 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 PTGS2P35354 604 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 GABRA4P48169 554 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZNF135P52742 658 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 KLC1Q07866 573 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 DPYSQ14117 519 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 ERMARDQ5T6L9 678 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 TMEM220Q6QAJ8 160 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 TRIM73Q86UV7 250 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 AMIGO1Q86WK6 493 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 ZNF677Q86XU0 584 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 CHERPQ8IWX8 916 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 TRIM42Q8IWZ5 723 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 PRSS58Q8IYP2 241 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 MIEF2Q96C03 454 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 EID2BQ96D98 161 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 RBM41Q96IZ5 413 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 RMDN2Q96LZ7 410 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
SMARCAL1-213ENST00000496037 SNRNP25Q9BV90 132 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms