RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CILP2Q8IUL8 1156 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 DENND6AQ8IWF6 608 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 TMEM102Q8N9M5 508 aaPredicted RBP9.2□□□□□ -0.94
MSH5-218ENST00000494646 OR2A1Q8NGT9 310 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 OR9A1PQ8NGU1 263 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 PROKR1Q8TCW9 393 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MAGEC3Q8TD91 643 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 PTERQ96BW5 349 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 SIGLEC10Q96LC7 697 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 SERPINB12Q96P63 405 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 C17orf62Q9BQA9 187 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 SELENOSQ9BQE4 189 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 DHRS4Q9BTZ2 278 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 GPR83Q9NYM4 423 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 NEU2Q9Y3R4 380 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 ZNF451Q9Y4E5 1061 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MAD1L1Q9Y6D9 718 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 MAU2Q9Y6X3 613 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 ESPL1Q14674 2120 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 SHANK1Q9Y566 2161 aa9.2□□□□□ -0.94
MSH5-218ENST00000494646 NUP210LQ5VU65 1888 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 CNTRLQ7Z7A1 2325 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 LOC105369274A0A096LPK9 316 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 LOC102723532A0A0G2JNH3 316 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 FAM237BA0A1B0GVD1 139 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 TARM1B6A8C7 271 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 H3BMM5 538 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 DSCR3O14972 297 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 KIF5CO60282 957 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 CEACAM4O75871 244 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 HAUS5O94927 633 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MATN4O95460 622 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 SYF2O95926 243 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 UMODP07911 640 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 CD63P08962 238 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MLNP12872 115 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 ITGAXP20702 1163 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OGNP20774 298 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 CCNFP41002 786 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MAGEA6P43360 314 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 SRSF1Q07955 248 aaKnown RBP eCLIP9.19□□□□□ -0.942e-10■■■□□ 15.3
MSH5-218ENST00000494646 GRM7Q14831 915 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 CYP1B1Q16678 543 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 RNF187Q5TA31 235 aaPredicted RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 ZNF470Q6ECI4 717 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 FBXO42Q6P3S6 717 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 ZNF549Q6P9A3 640 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OVCH1Q7RTY7 1134 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 PPP1R32Q7Z5V6 425 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 ATCAYQ86WG3 371 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OR4N4Q8N0Y3 316 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 AGGF1Q8N302 714 aaeCLIP9.19□□□□□ -0.94
MSH5-218ENST00000494646 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 NAT8LQ8N9F0 302 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 PPFIBP2Q8ND30 876 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MCUQ8NE86 351 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OR2L3Q8NG85 312 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OR2Y1Q8NGV0 311 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 CPT1CQ8TCG5 803 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 DLG3Q92796 817 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 FER1L6-AS2Q96M78 137 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 OSBPL9Q96SU4 736 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 PKP4Q99569 1192 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 SOX17Q9H6I2 414 aaPredicted RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 IARS2Q9NSE4 1012 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 CUTCQ9NTM9 273 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 C20orf96Q9NUD7 363 aaPredicted RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 P4HTMQ9NXG6 502 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MAP10Q9P2G4 905 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 G3BP2Q9UN86 482 aaKnown RBP9.19□□□□□ -0.94
MSH5-218ENST00000494646 SRPK3Q9UPE1 567 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 MRFAP1Q9Y605 127 aa9.19□□□□□ -0.94
MSH5-218ENST00000494646 ZCWPW2A0A1B0GU75 182 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 HYKKA2RU49 373 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 ARHGEF33A8MVX0 844 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 SRPX2O60687 465 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 DPM1O60762 260 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PHF2O75151 1096 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 ALOX12BO75342 701 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 VPS4BO75351 444 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PSIP1O75475 530 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 BANF1O75531 89 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 USP1O94782 785 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 MED26O95402 600 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PIM1P11309 404 aaPredicted RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 GNLYP22749 145 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CMPK1P30085 196 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 SLC1A2P43004 574 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 GCGRP47871 477 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 UQCRFS1P47985 274 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CD97P48960 835 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 CLCN7P51798 805 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 ADARP55265 1226 aaKnown RBP9.18□□□□□ -0.94
MSH5-218ENST00000494646 MPP1Q00013 466 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 GBX1Q14549 363 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 PPP1R7Q15435 360 aa9.18□□□□□ -0.94
MSH5-218ENST00000494646 INPP5JQ15735 1006 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms