RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 XKR6Q5GH73 641 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 LY6G5CQ5SRR4 150 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 LRIF1Q5T3J3 769 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 CES5AQ6NT32 575 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 ARHGAP22Q7Z5H3 698 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 CALHM3Q86XJ0 350 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 OR7A2PQ8NGA2 310 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 ASZ1Q8WWH4 475 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 MED8Q96G25 268 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 MTERF1Q99551 399 aaKnown RBP10.89□□□□□ -0.67
CHMP3-209ENST00000494623 HEPHQ9BQS7 1158 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 OSBPL10Q9BXB5 764 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 PCDH12Q9NPG4 1184 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 AP3M1Q9Y2T2 418 aa10.89□□□□□ -0.67
CHMP3-209ENST00000494623 TMX2-CTNND1H3BSU7 103 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PER2O15055 1255 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 SLC16A5O15375 505 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 HS6ST1O60243 411 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 CPSF4O95639 269 aaKnown RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 POLR2EP19388 210 aaKnown RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 VIPR1P32241 457 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 MAPK10P53779 464 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 SLC14A1Q13336 389 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TMEM26Q6ZUK4 368 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 THAP5Q7Z6K1 395 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 SYT12Q8IV01 421 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ADHFE1Q8IWW8 467 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 C8orf59Q8N0T1 100 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 LILRA3Q8N6C8 439 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF555Q8NEP9 628 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 DNAJB8Q8NHS0 232 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 FRS2Q8WU20 508 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PYURFQ96I23 114 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 SPHK2Q9NRA0 654 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TDP1Q9NUW8 608 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ERVW-1Q9UQF0 538 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 MAN2B2Q9Y2E5 1009 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 HIDE1A8MVS5 230 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 KPNA5O15131 536 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 SGTAO43765 313 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 FOXD2O60548 495 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ATE1O95260 518 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF682O95780 498 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 RETP07949 1114 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 JUPP14923 745 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TIMP2P16035 220 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 IL7RP16871 459 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 EFNA1P20827 205 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 XPAP23025 273 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PTPN6P29350 595 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 KIR3DL1P43629 444 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 STT3AP46977 705 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PREPP48147 710 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 NRIP1P48552 1158 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 AP1S2P56377 157 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ERVFC1P60507 584 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 MEP1AQ16819 746 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 CCSMST1Q4G0I0 132 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TTC23Q5W5X9 447 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 BRAT1Q6PJG6 821 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF621Q6ZSS3 439 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF551Q7Z340 670 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PLPP6Q8IY26 295 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 EID3Q8N140 333 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF366Q8N895 744 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 GAB3Q8WWW8 586 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PANX1Q96RD7 426 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TCF25Q9BQ70 676 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 AMBRA1Q9C0C7 1298 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 TMED5Q9Y3A6 229 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PCDHGA8Q9Y5G5 932 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 WNT6Q9Y6F9 365 aa10.88□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF106Q9H2Y7 1883 aaKnown RBP10.88□□□□□ -0.67
CHMP3-209ENST00000494623 PLXNB3Q9ULL4 1909 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FADS2P1A8MWK0 482 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 EVPLLA8MZ36 301 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FPGTO14772 594 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 HPRP00739 348 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PFKLP17858 780 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 CD22P20273 847 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PIGAP37287 484 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 DCTP40126 519 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 PPP2R2BQ00005 443 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ABHD18Q0P651 414 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 SP140Q13342 867 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 NAE1Q13564 534 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 LRRC23Q53EV4 343 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ANKRD26P1Q6NSI1 321 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 THOC6Q86W42 341 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 RAVER1Q8IY67 606 aaKnown RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 FAM9CQ8IZT9 166 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 SVOPLQ8N434 492 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-209ENST00000494623 OR52E4Q8NGH9 312 aa10.87□□□□□ -0.67
CHMP3-209ENST00000494623 SGCDQ92629 289 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms