RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TMEM150CB9EJG8 249 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 BANF1O75531 89 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 USP1O94782 785 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 GCAP28676 217 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 STX2P32856 288 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 RORAP35398 523 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 ITGA1P56199 1179 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 POLE2P56282 527 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 DMTNQ08495 405 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 NEPROQ6NW34 567 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 TRIM73Q86UV7 250 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 ANKMY2Q8IV38 441 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 LMNTD2Q8IXW0 634 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 LINC01555Q8NAE3 123 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 SLC38A9Q8NBW4 561 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 OR2L8Q8NGY9 312 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 TRIM56Q9BRZ2 755 aaKnown RBP12.72□□□□□ -0.37
ERCC3-209ENST00000494464 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 SENP1Q9P0U3 644 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 PSMC3IPQ9P2W1 217 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-209ENST00000494464 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
ERCC3-209ENST00000494464 PIEZO2Q9H5I5 2752 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 E7EQ34 232 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 H3BMH7 237 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 NIPSNAP2O75323 286 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CREG1O75629 220 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 FKBP9O95302 570 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 S1PR4O95977 384 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 PKMP14618 531 aaKnown RBP12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CYP2A7P20853 494 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CD9P21926 228 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 FMO4P31512 558 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CCNFP41002 786 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 GABRA4P48169 554 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 KCNAB2Q13303 367 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 ZNF470Q6ECI4 717 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 ZNF605Q86T29 641 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 AGGF1Q8N302 714 aaeCLIP12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 HMGCLL1Q8TB92 370 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 FBF1Q8TES7 1133 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 RAD51AP1Q96B01 352 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 SLC22A18Q96BI1 424 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 SIGLEC10Q96LC7 697 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CYTH2Q99418 400 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 ACTL8Q9H568 366 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 ACTR5Q9H9F9 607 aaPredicted RBP12.71□□□□□ -0.37
ERCC3-209ENST00000494464 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
ERCC3-209ENST00000494464 FAM60AQ9NP50 221 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CTNNAL1Q9UBT7 734 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 SERTAD3Q9UJW9 196 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 CRYL1Q9Y2S2 319 aa12.71□□□□□ -0.37
ERCC3-209ENST00000494464 BAHCC1Q9P281 2608 aa12.71□□□□□ -0.38
ERCC3-209ENST00000494464 ISM1B1AKI9 464 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 MEN1O00255 615 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 KATNA1O75449 491 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 C1orf105O95561 183 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 KLK3P07288 261 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 HBQ1P09105 142 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 PLA2G2AP14555 144 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 PTPN4P29074 926 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SSTR1P30872 391 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 LSP1P33241 339 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 THOC5Q13769 683 aaKnown RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 ZIC1Q15915 447 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 HP1BP3Q5SSJ5 553 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 ATP1A1-AS1Q5TC04 95 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 PRAMEF17Q5VTA0 474 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 FAM199XQ6PEV8 388 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 TTC23LQ6PF05 361 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 CYS1Q717R9 158 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF771Q7L3S4 317 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SYVN1Q86TM6 617 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 IGDCC3Q8IVU1 814 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SYTL1Q8IYJ3 562 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 GPR135Q8IZ08 494 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 CNPY4Q8N129 248 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 RAB42Q8N4Z0 105 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 ZBTB2Q8N680 514 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 CALML6Q8TD86 181 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 APOBEC4Q8WW27 367 aaKnown RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 MR1Q95460 341 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 FOPNLQ96NB1 174 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 EBNA1BP2Q99848 306 aaKnown RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 DPH2Q9BQC3 489 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-209ENST00000494464 NAT9Q9BTE0 207 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SLC25A18Q9H1K4 315 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms