RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 OR5T3Q8NGG3 340 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 ART5Q96L15 291 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 NPY6RQ99463 290 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SLC32A1Q9H598 525 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 TUBA8Q9NY65 449 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-207ENST00000494090 ACTR3BQ9P1U1 418 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 VPS29Q9UBQ0 182 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 EDDM13A0A1B0GTR0 161 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 A0A1W2PRU2 124 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 C9J4A7 227 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SPIN4Q56A73 249 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 TMEM164Q5U3C3 297 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 ADNP2Q6IQ32 1131 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 NANOGNBQ7Z5D8 188 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 RGMAQ96B86 450 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 PSKH2Q96QS6 385 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SLC29A3Q9BZD2 475 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 NKIRAS2Q9NYR9 191 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SPATA7Q9P0W8 599 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 CACNG4Q9UBN1 327 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 RPL36Q9Y3U8 105 aaKnown RBP18.71■□□□□ 0.59
COL27A1-207ENST00000494090 CAPN14A8MX76 684 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 J3KR12 359 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 PGLSO95336 258 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 AGXTP21549 392 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CASP9P55211 416 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SCARB2Q14108 478 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 KLHDC10Q6PID8 442 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 QSOX2Q6ZRP7 698 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 ZNF527Q8NB42 609 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 TMCO6Q96DC7 493 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SP140LQ9H930 580 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 HAS3O00219 553 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 HMGN1P05114 100 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 S100A1P23297 94 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SWI5Q1ZZU3 235 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 IQCCQ4KMZ1 466 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 ANO7Q6IWH7 933 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 LRRTM4Q86VH4 590 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 RASGEF1AQ8N9B8 481 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CHST4Q8NCG5 386 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 PEBP4Q96S96 227 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 PKP2Q99959 881 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CLEC4AQ9UMR7 237 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SCML2Q9UQR0 700 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 ABCC6O95255 1503 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 TEX46H3BTG2 121 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 C8BP07358 591 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 FMO3P31513 532 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 VIPR1P32241 457 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 GNALP38405 381 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 ABATP80404 500 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 RHDQ02161 417 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 FCHO2Q0JRZ9 810 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 OR2AP1Q8NGE2 309 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 UFD1Q92890 307 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CCM2Q9BSQ5 444 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CARS2Q9HA77 564 aaKnown RBP18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SIX4Q9UIU6 781 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 KCPQ6ZWJ8 1503 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 BCAS2O75934 225 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-207ENST00000494090 HMGCS1Q01581 520 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 TLE2Q04725 743 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CRHR2Q13324 411 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 PDSS2Q86YH6 399 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 MINDY2Q8NBR6 621 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 OR10G2Q8NGC3 310 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 DERL2Q9GZP9 239 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SRRDQ9UH36 339 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 NR2C1P13056 603 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 GSK3BP49841 420 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 CBX3Q13185 183 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 C9orf43Q8TAL5 461 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-207ENST00000494090 DENND1AQ8TEH3 1009 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 TMBIM1Q969X1 311 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 MGME1Q9BQP7 344 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 TVP23BQ9NYZ1 205 aa18.7■□□□□ 0.58
COL27A1-207ENST00000494090 PFKMP08237 780 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 NCBP2P52298 156 aaKnown RBP eCLIP18.69■□□□□ 0.582e-8■□□□□ 9.8
COL27A1-207ENST00000494090 PLEKHG6Q3KR16 790 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PRAMEF14Q5SWL7 426 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 RBM20Q5T481 1227 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PRAMEF13Q5VWM6 474 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PPP1R14BQ96C90 147 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 SIPA1Q96FS4 1042 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 TRMT61BQ9BVS5 477 aaKnown RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 IFT27Q9BW83 186 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 GALPQ9UBC7 116 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 MED31Q9Y3C7 131 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 CLIC1O00299 241 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 TNFP01375 233 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 F7P08709 466 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-207ENST00000494090 MXD1Q05195 221 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 EOGTQ5NDL2 527 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 SEC14L1Q92503 715 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 CMTM7Q96FZ5 175 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PCDHGB5Q9Y5G0 923 aa18.69■□□□□ 0.58
COL27A1-207ENST00000494090 PDLIM1O00151 329 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms