RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	GRID1	Q9ULK0	1009 aa		18.21	■□□□□ 0.51
ABCA2-222	ENST00000494046	TCAF1	Q9Y4C2	921 aa		18.21	■□□□□ 0.51
ABCA2-222	ENST00000494046		J3QKU1	62 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	BTN3A1	O00481	513 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PYGB	P11216	843 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CCR10	P46092	362 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CD151	P48509	253 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CSE1L	P55060	971 aa	Known RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CRADD	P78560	199 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	SEMA3A	Q14563	771 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	LACTB2	Q53H82	288 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	SPANXN3	Q5MJ09	141 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	FAM199X	Q6PEV8	388 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	AFTPH	Q6ULP2	937 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PACS1	Q6VY07	963 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	LDB1	Q86U70	411 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	OR5AR1	Q8NGP9	310 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	OR4L1	Q8NH43	312 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CT55	Q8WUE5	264 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CCT6B	Q92526	530 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CATSPER2	Q96P56	530 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	RANBP9	Q96S59	729 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	MVB12B	Q9H7P6	319 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	ACTR5	Q9H9F9	607 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	LHX9	Q9NQ69	397 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CHRAC1	Q9NRG0	131 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	BFAR	Q9NZS9	450 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PADI1	Q9ULC6	663 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	HEMK1	Q9Y5R4	338 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	TLN1	Q9Y490	2541 aa	Known RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	AP3B1	O00203	1094 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	TERT	O14746	1132 aa	Known RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	FTH1	P02794	183 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PRDX3	P30048	256 aa	Known RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CCNF	P41002	786 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PRAME	P78395	509 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	LAMB3	Q13751	1172 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	ERV3-1	Q14264	604 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	CRYM	Q14894	314 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	PRAMEF17	Q5VTA0	474 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	AMIGO1	Q86WK6	493 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	ZNF501	Q96CX3	271 aa	Predicted RBP	18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	SLC25A18	Q9H1K4	315 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	VPS11	Q9H270	941 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	MKS1	Q9NXB0	559 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	ASF1A	Q9Y294	204 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	ARL2BP	Q9Y2Y0	163 aa		18.2	■□□□□ 0.5
ABCA2-222	ENST00000494046	COPE	O14579	308 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	LIN7A	O14910	233 aa	Predicted RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	GSTM1	P09488	218 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	FURIN	P09958	794 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	OR56A5	P0C7T3	313 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	SFTPC	P11686	197 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	PVR	P15151	417 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	NPY2R	P49146	381 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	MC1R	Q01726	317 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	GSTM4	Q03013	218 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	ACVR1	Q04771	509 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	KCNAB2	Q13303	367 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	SYTL3	Q4VX76	610 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	FASTKD1	Q53R41	847 aa	Known RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	TMTC4	Q5T4D3	741 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	CGB2	Q6NT52	195 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	TMEM126B	Q8IUX1	230 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	C10orf67	Q8IYJ2	551 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	PPHLN1	Q8NEY8	458 aa	Known RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	ZNF75CP	Q92670	426 aa	Predicted RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	TFB2M	Q9H5Q4	396 aa	Known RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	C1GALT1	Q9NS00	363 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	SLC17A7	Q9P2U7	560 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	TDRKH	Q9Y2W6	561 aa	Known RBP	18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	PCDHB3	Q9Y5E6	796 aa		18.19	■□□□□ 0.5
ABCA2-222	ENST00000494046	PIKFYVE	Q9Y2I7	2098 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	TENM4	Q6N022	2769 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	QSOX1	O00391	747 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	SCRG1	O75711	98 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	DHRS4L1	P0CG22	281 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	ST6GAL1	P15907	406 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	MGAT5	Q09328	741 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	DNASE1L3	Q13609	305 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	LYPLAL1	Q5VWZ2	237 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	TIFAB	Q6ZNK6	161 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	FAM47E	Q6ZV65	393 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	TMEM135	Q86UB9	458 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	PTRH1	Q86Y79	214 aa	Known RBP	18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	ADGRF3	Q8IZF5	1079 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	TTC1	Q99614	292 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	TRIM4	Q9C037	500 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	IQCG	Q9H095	443 aa	Known RBP	18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	RIMKLB	Q9ULI2	386 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	PLAGL1	Q9UM63	463 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	ICK	Q9UPZ9	632 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	BTRC	Q9Y297	605 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	SPTA1	P02549	2419 aa		18.18	■□□□□ 0.5
ABCA2-222	ENST00000494046	SLC5A10	A0PJK1	596 aa		18.17	■□□□□ 0.5
ABCA2-222	ENST00000494046	MAGEB16	A2A368	324 aa		18.17	■□□□□ 0.5
ABCA2-222	ENST00000494046	IQCF5	A8MTL0	148 aa		18.17	■□□□□ 0.5
ABCA2-222	ENST00000494046	MATN2	O00339	956 aa		18.17	■□□□□ 0.5
ABCA2-222	ENST00000494046	EDF1	O60869	148 aa	Known RBP	18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms