RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 A0A1B0GTL3 188 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 FAM221BA6H8Z2 402 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 LILRA5A6NI73 299 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 GIPC1O14908 333 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 PCDHGA12O60330 932 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 TGDSO95455 350 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 CHRM5P08912 532 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 ALPPL2P10696 532 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 NPPBP16860 134 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 PRDX3P30048 256 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 PEBP1P30086 187 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 RPL14P50914 215 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 PCDH1Q08174 1060 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 THEMIS2Q5TEJ8 643 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 ZCCHC8Q6NZY4 707 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 LETMD1Q6P1Q0 360 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 CPLX4Q7Z7G2 160 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 SLC35F3Q8IY50 421 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 ADGRF3Q8IZF5 1079 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 MINDY1Q8N5J2 469 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 OR4E2Q8NGC2 313 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 OR4C6Q8NH72 309 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 PIWIL2Q8TC59 973 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 AGR3Q8TD06 166 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 SETD7Q8WTS6 366 aaKnown RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 ATP6V1E2Q96A05 226 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 CCT8L2Q96SF2 557 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 HAUS8Q9BT25 410 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 NTMT1Q9BV86 223 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 DUSP23Q9BVJ7 150 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 TWSG1Q9GZX9 223 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 RABEP2Q9H5N1 569 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 MARCOQ9UEW3 520 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-231ENST00000494043 TAC3Q9UHF0 121 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 ZNF225Q9UK10 706 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 KCNE2Q9Y6J6 123 aa11.02□□□□□ -0.65
MCF2L-231ENST00000494043 OR6C74A6NCV1 312 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 TMEM233B4DJY2 109 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 E7EQ34 232 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 BTN3A3O00478 584 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 CLGNO14967 610 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 AZIN1O14977 448 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 PPM1DO15297 605 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 PRICKLE3O43900 615 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 OR4F21O95013 312 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 CLDN9O95484 217 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 FAM107AO95990 144 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ENO1P06733 434 aaKnown RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 FGF4P08620 206 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 EBLN1P0CF75 366 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ZNF883P0CG24 379 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 TROVE2P10155 538 aaKnown RBP eCLIP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 KITP10721 976 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 GNAZP19086 355 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 PSMB5P28074 263 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ARL1P40616 181 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 HK2P52789 917 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ATXN3P54252 364 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ERVPABLB-1P60509 514 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 CHIT1Q13231 466 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 BIRC2Q13490 618 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 KIR2DS3Q14952 304 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 GGTA1PQ4G0N0 100 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 KANK2Q63ZY3 851 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 MILR1Q7Z6M3 343 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ZNF761Q86XN6 746 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 AFAP1L2Q8N4X5 818 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 DCBLD1Q8N8Z6 715 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 OR4F6Q8NGB9 312 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 SLC5A11Q8WWX8 675 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ATOH1Q92858 354 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 NEIL2Q969S2 332 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 FAR2Q96K12 515 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 CDK15Q96Q40 435 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-231ENST00000494043 SLC29A3Q9BZD2 475 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 IRF2BPLQ9H1B7 796 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ACTR8Q9H981 624 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 SPHK1Q9NYA1 384 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 TRPS1Q9UHF7 1281 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 SH2B3Q9UQQ2 575 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 TRAF6Q9Y4K3 522 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 USH1CQ9Y6N9 552 aa11.01□□□□□ -0.65
MCF2L-231ENST00000494043 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 KCNE1BA0A087WTH5 132 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 LNP1A1A4G5 178 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 PIPSLA2A3N6 862 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 RHPN2P1A8MT19 583 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 MATN2O00339 956 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 TRIM38O00635 465 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 HDAC3O15379 428 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 SIGLEC6O43699 453 aa11□□□□□ -0.65
MCF2L-231ENST00000494043 NUDT21O43809 227 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms