RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 EPHX3Q9H6B9 360 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ATXN10Q9UBB4 475 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SLCO3A1Q9UIG8 710 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 RPS6KA6Q9UK32 745 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 USP22Q9UPT9 525 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SLC22A14Q9Y267 594 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NEUROG3Q9Y4Z2 214 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 H0YIV9 168 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF197O14709 1029 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CCL16O15467 120 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 XYLBO75191 536 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 PSIP1O75475 530 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 PRKD3O94806 890 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 JUNBP17275 347 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 NELFEP18615 380 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 SDC1P18827 310 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 SOX11P35716 441 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 RXRGP48443 463 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 MNX1P50219 401 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CDH15P55291 814 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 GABARAPL2P60520 117 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 PLIN5Q00G26 463 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 PON2Q15165 354 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF805Q5CZA5 627 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 HENMT1Q5T8I9 393 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF773Q6PK81 442 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 DPPA4Q7L190 304 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 ADIPOR2Q86V24 386 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CLVS1Q8IUQ0 354 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 OR8J2Q8NGG1 315 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 WFIKKN2Q8TEU8 576 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 BTN2A2Q8WVV5 523 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 HDAC2Q92769 488 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 MTFMTQ96DP5 389 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 NPLQ9BXD5 320 aaPredicted RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CXorf21Q9HAI6 301 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 SERHLQ9NQF3 203 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 GPRC5BQ9NZH0 403 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 IL36AQ9UHA7 158 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 DPP7Q9UHL4 492 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 BAG5Q9UL15 447 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 DLGAP4Q9Y2H0 992 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 V9GYQ6 96 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 CENPFP49454 3210 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 PIKFYVEQ9Y2I7 2098 aa9.38□□□□□ -0.91
NPHP3-209ENST00000493732 E2F6O75461 281 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HNRNPA1P09651 372 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CSF2RAP15509 400 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GJA1P17302 382 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GZMMP51124 257 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ACSM2AQ08AH3 577 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 GRSF1Q12849 480 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PGS1Q32NB8 556 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ANXA8L1Q5VT79 327 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ACSM2BQ68CK6 577 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 NEK5Q6P3R8 708 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 DHRS4L2Q6PKH6 230 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 DET1Q7L5Y6 550 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 THOC6Q86W42 341 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 KLHL23Q8NBE8 558 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CHST14Q8NCH0 376 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 FBXO15Q8NCQ5 510 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 MUS81Q96NY9 551 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TSSK3Q96PN8 268 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 DOK1Q99704 481 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CCM2Q9BSQ5 444 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TBCDQ9BTW9 1192 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CDH7Q9ULB5 785 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HELZP42694 1942 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 A0A1B0GTW7 788 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 H0Y858 1186 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 KIAA0355O15063 1070 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 EPN2O95208 641 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 CPNE6O95741 557 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 SERPINA1P01009 418 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 MT-ND1P03886 318 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PCNAP12004 261 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 HOXB9P17482 250 aaPredicted RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 EEF1B2P24534 225 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 DCKP27707 260 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 PFN3P60673 137 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 ST8SIA6P61647 398 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 VAC14Q08AM6 782 aa9.37□□□□□ -0.91
NPHP3-209ENST00000493732 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
NPHP3-209ENST00000493732 SPIN4Q56A73 249 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms