RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 U3KQA8 63 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 IGHV1OR21-1A0A087WYE8 117 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 OR5K3A6NET4 321 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 K7EPI3 171 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 CBFA2T3O75081 653 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 KATNA1O75449 491 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 BPGMP07738 259 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 CSRP1P21291 193 aaKnown RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 ALDH4A1P30038 563 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 CAPZBP47756 277 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 SLC6A12P48065 614 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 SERPINB4P48594 390 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 NAE1Q13564 534 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 MPP2Q14168 576 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 SLC5A12Q1EHB4 618 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 PTCHD3Q3KNS1 767 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 CFAP157Q5JU67 520 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 LIPMQ5VYY2 423 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 GUSBP11Q6P575 273 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 WDR74Q6RFH5 385 aaPredicted RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 SPRED1Q7Z699 444 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 GLRX5Q86SX6 157 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 NUDCD3Q8IVD9 361 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 SFTPA2Q8IWL1 248 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 ADGRF3Q8IZF5 1079 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 IFI44Q8TCB0 444 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 PPP4R1Q8TF05 950 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 PHF21BQ96EK2 531 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 MED8Q96G25 268 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 MAGEB10Q96LZ2 347 aaPredicted RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 TWSG1Q9GZX9 223 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 XKR8Q9H6D3 395 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 DNAJC11Q9NVH1 559 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
SNX17-208ENST00000493711 HRASLS2Q9NWW9 162 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 GPRC5BQ9NZH0 403 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 PLAGL1Q9UM63 463 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 DYRK1BQ9Y463 629 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 ANGPTL3Q9Y5C1 460 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 PCDHGA1Q9Y5H4 931 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 KCNE2Q9Y6J6 123 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 CACNA1GO43497 2377 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 DOCK9Q9BZ29 2069 aa12.02□□□□□ -0.49
SNX17-208ENST00000493711 TPRP12270 2363 aaKnown RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 PRAMEF33A0A0G2JMD5 474 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 ISM1B1AKI9 464 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 GDF9O60383 454 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 NEFHP12036 1026 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 EPB42P16452 691 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 GRK2P25098 689 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 EEF1DP29692 281 aaKnown RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 CMPK1P30085 196 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 PPM1FP49593 454 aaPredicted RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 TBPL1P62380 186 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 PCLAFQ15004 111 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 PDK4Q16654 411 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 LCTLQ6UWM7 567 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 MBOAT1Q6ZNC8 495 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 THOC6Q86W42 341 aaKnown RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 LRRC56Q8IYG6 542 aaPredicted RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 KIRREL3Q8IZU9 778 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 LINC01555Q8NAE3 123 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 FAM76AQ8TAV0 307 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 IL17FQ96PD4 163 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 CCDC3Q9BQI4 270 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 TBC1D10AQ9BXI6 508 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 ATG10Q9H0Y0 220 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 ABCG4Q9H172 646 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 INTS9Q9NV88 658 aaKnown RBP12.01□□□□□ -0.49
SNX17-208ENST00000493711 ANKMY1Q9P2S6 941 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 LRP4O75096 1905 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
SNX17-208ENST00000493711 GSAPA4D1B5 854 aa12□□□□□ -0.49
SNX17-208ENST00000493711 BTN3A3O00478 584 aa12□□□□□ -0.49
SNX17-208ENST00000493711 GIPC1O14908 333 aa12□□□□□ -0.49
SNX17-208ENST00000493711 CLGNO14967 610 aa12□□□□□ -0.49
SNX17-208ENST00000493711 TAPBPO15533 448 aa12□□□□□ -0.49
SNX17-208ENST00000493711 B4GAT1O43505 415 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PRICKLE3O43900 615 aaPredicted RBP12□□□□□ -0.49
SNX17-208ENST00000493711 CCNT2O60583 730 aaKnown RBP12□□□□□ -0.49
SNX17-208ENST00000493711 WDR47O94967 919 aa12□□□□□ -0.49
SNX17-208ENST00000493711 CPNE6O95741 557 aa12□□□□□ -0.49
SNX17-208ENST00000493711 MLYCDO95822 493 aa12□□□□□ -0.49
SNX17-208ENST00000493711 GNAZP19086 355 aa12□□□□□ -0.49
SNX17-208ENST00000493711 POLR2CP19387 275 aaPredicted RBP12□□□□□ -0.49
SNX17-208ENST00000493711 CD1CP29017 333 aa12□□□□□ -0.49
SNX17-208ENST00000493711 ALDH3A1P30838 453 aa12□□□□□ -0.49
SNX17-208ENST00000493711 HSPA7P48741 367 aa12□□□□□ -0.49
SNX17-208ENST00000493711 OR1D5P58170 312 aa12□□□□□ -0.49
SNX17-208ENST00000493711 KCNC4Q03721 635 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PCDH1Q08174 1060 aa12□□□□□ -0.49
SNX17-208ENST00000493711 CDC16Q13042 620 aa12□□□□□ -0.49
SNX17-208ENST00000493711 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms