RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 IL17FQ96PD4 163 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 NRTNQ99748 197 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 TUBB1Q9H4B7 451 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 CCDC177Q9NQR7 707 aaPredicted RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SPASTQ9UBP0 616 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 PLAGL1Q9UM63 463 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 SH2B3Q9UQQ2 575 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 COLEC10Q9Y6Z7 277 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
VPS52-220ENST00000493674 RIF1Q5UIP0 2472 aaKnown RBP12.25□□□□□ -0.45
VPS52-220ENST00000493674 PRAMEF33A0A0G2JMD5 474 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 TRPC5OSA6NMA1 111 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 LMO7DNF2Z398 122 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 PIAS2O75928 621 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 CLDN9O95484 217 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 GNSP15586 552 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 CD22P20273 847 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 DPP6P42658 865 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 C21orf59P57076 290 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SF3A3Q12874 501 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■■□□□ 13.6
VPS52-220ENST00000493674 SHBQ15464 509 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 TCEA2Q15560 299 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 ZNF423Q2M1K9 1284 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 KIF19Q2TAC6 998 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SLCO4C1Q6ZQN7 724 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 EFL1Q7Z2Z2 1120 aaKnown RBP12.24□□□□□ -0.45
VPS52-220ENST00000493674 TAF8Q7Z7C8 310 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 GKN2Q86XP6 184 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SYT12Q8IV01 421 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SNX31Q8N9S9 440 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 TWIST2Q8WVJ9 160 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SMPDL3AQ92484 453 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 CDK15Q96Q40 435 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 MIPEPQ99797 713 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 CCDC28BQ9BUN5 200 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 PCBD2Q9H0N5 130 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 EHD1Q9H4M9 534 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 LNPEPQ9UIQ6 1025 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
VPS52-220ENST00000493674 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
VPS52-220ENST00000493674 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
VPS52-220ENST00000493674 SERTM1A2A2V5 107 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 E7EQ34 232 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 AQP9O43315 295 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 KDM1AO60341 852 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CAPN1P07384 714 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 PRR35P0CG20 571 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 HGFP14210 728 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 PEBP1P30086 187 aaKnown RBP12.23□□□□□ -0.45
VPS52-220ENST00000493674 SHMT2P34897 504 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 C1orf61Q13536 156 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 PDCD2Q16342 344 aaPredicted RBP12.23□□□□□ -0.45
VPS52-220ENST00000493674 PRAMEF14Q5SWL7 426 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.23□□□□□ -0.45
VPS52-220ENST00000493674 PRAMEF13Q5VWM6 474 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 LIPJQ5W064 366 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 FAM91A1Q658Y4 838 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 ATG9BQ674R7 924 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 FOXR1Q6PIV2 292 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 MILR1Q7Z6M3 343 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 SFTPA2Q8IWL1 248 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
VPS52-220ENST00000493674 RAB42Q8N4Z0 105 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CDYL2Q8N8U2 506 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 DCBLD1Q8N8Z6 715 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 LMNTD1Q8N9Z9 388 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 ACTRT2Q8TDY3 377 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 ZDHHC1Q8WTX9 485 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 PATE1Q8WXA2 126 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 USP7Q93009 1102 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 NEIL2Q969S2 332 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CXorf40BQ96DE9 158 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 C19orf60Q96EN9 201 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 MED8Q96G25 268 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 OR52B2Q96RD2 323 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CCT7Q99832 543 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CPNE7Q9UBL6 633 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 TIMM22Q9Y584 194 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 SNX11Q9Y5W9 270 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 CSNK1G3Q9Y6M4 447 aa12.23□□□□□ -0.45
VPS52-220ENST00000493674 ZFHX2Q9C0A1 2572 aaPredicted RBP12.22□□□□□ -0.45
VPS52-220ENST00000493674 FAM221BA6H8Z2 402 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 NPIPB8E9PQR5 432 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 GIPC1O14908 333 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
VPS52-220ENST00000493674 CLGNO14967 610 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 PIP5K1BO14986 540 aa12.22□□□□□ -0.45
VPS52-220ENST00000493674 YY2O15391 372 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms