RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CHAF1BQ13112 559 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 KLHL38Q2WGJ6 581 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 CTSL3PQ5NE16 218 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 PRMT9Q6P2P2 845 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 LINC01555Q8NAE3 123 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 ADAMTS17Q8TE56 1095 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 KCNJ9Q92806 393 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 INPP5DQ92835 1189 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 RERGQ96A58 199 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 SERPINB12Q96P63 405 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 NRTNQ99748 197 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 WDR54Q9H977 334 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 MRPS30Q9NP92 439 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 ATP13A2Q9NQ11 1180 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 CIDEBQ9UHD4 219 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 TCRBV7S3A2A0A539 114 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 DSCR3O14972 297 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 MATN4O95460 622 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 SYF2O95926 243 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 GRIA3P42263 894 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 MAGEA3P43357 314 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 GABRA4P48169 554 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 ABATP80404 500 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 ATP1A4Q13733 1029 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 MUM1Q2TAK8 710 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 THEMIS2Q5TEJ8 643 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 VWA5B1Q5TIE3 1220 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 LCN10Q6JVE6 187 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 OVCH1Q7RTY7 1134 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 CAND1Q86VP6 1230 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 NAT8LQ8N9F0 302 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 OR2L3Q8NG85 312 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 FLVCR1-AS1Q8TAF5 88 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 COL26A1Q96A83 441 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 TRIM55Q9BYV6 548 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 SLC29A3Q9BZD2 475 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 TSR3Q9UJK0 312 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 KLHL20Q9Y2M5 609 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 NFS1Q9Y697 457 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
PDLIM2-217ENST00000491330 KALRNO60229 2985 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 USP27XA6NNY8 438 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 EIF3FO00303 357 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 EIF2S1P05198 315 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 CAPN1P07384 714 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 HIST1H2AGP0C0S8 130 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 MPC1LP0DKB6 136 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 PGAM1P18669 254 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 HIST1H2ADP20671 130 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 ARNTP27540 789 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 PEBP1P30086 187 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 CARSP49589 748 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 VSX2P58304 361 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 GRB7Q14451 532 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 WASHC2DQ5SRD0 308 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 ZNF385CQ66K41 422 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 CPZQ66K79 652 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 CENPUQ71F23 418 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 MRGPREQ86SM8 312 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 CREG2Q8IUH2 290 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 PDIK1LQ8N165 341 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 MCOLN3Q8TDD5 553 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 FAM136AQ96C01 138 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 HIST1H2AHQ96KK5 128 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 HIST1H2AJQ99878 128 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 ZFYVE21Q9BQ24 234 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 H2AFJQ9BTM1 129 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 ZNF304Q9HCX3 659 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 P4HTMQ9NXG6 502 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 MAP10Q9P2G4 905 aa15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 ZC3H7BQ9UGR2 993 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 TRMT6Q9UJA5 497 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 HELZ2Q9BYK8 2649 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 GCN1Q92616 2671 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-217ENST00000491330 A0A0J9YVX5 310 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 HYKKA2RU49 373 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 DNALI1O14645 258 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 PSIP1O75475 530 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 KLF7O75840 302 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 CEACAM4O75871 244 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ANXA5P08758 320 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 NR1D1P20393 614 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 HRH2P25021 359 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 PNLIPRP1P54315 467 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 AIMP2Q13155 320 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 CTBP1Q13363 440 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 SLC9A5Q14940 896 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 MORF4L2Q15014 288 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 RBBP7Q16576 425 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 NDUFA9Q16795 377 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ACSBG2Q5FVE4 666 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 DCAF10Q5QP82 559 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 RNASEH2BQ5TBB1 312 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ANKRD22Q5VYY1 191 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 FCRL6Q6DN72 434 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ADCK2Q7Z695 626 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 KCNMB4Q86W47 210 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 FAM20CQ8IXL6 584 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms