RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 LGI2Q8N0V4 545 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 EID3Q8N140 333 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 BMPERQ8N8U9 685 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 OLIG1Q8TAK6 271 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 SETD6Q8TBK2 473 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 FAM71F1Q96KD3 344 aaPredicted RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 LRR1Q96L50 414 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 FER1L6-AS2Q96M78 137 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 ZMYND12Q9H0C1 365 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 FN3KQ9H479 309 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF696Q9H7X3 374 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 Q9H8V8 135 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 INTS9Q9NV88 658 aaKnown RBP5.06□□□□□ -1.6
VPS26A-206ENST00000489794 P4HTMQ9NXG6 502 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 TMED3Q9Y3Q3 217 aa5.06□□□□□ -1.6
VPS26A-206ENST00000489794 IGHV4-4A0A075B6R2 117 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 A0A087WV48 116 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 SOCS5O75159 536 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 RPS6KA5O75582 802 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 NGFP01138 241 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 HMBSP08397 361 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 GP1BBP13224 206 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 SCG2P13521 617 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 GNB3P16520 340 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 CYP11B2P19099 503 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 VAMP7P51809 220 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 NR0B1P51843 470 aaKnown RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 GNB1P62873 340 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 FAM174BQ3ZCQ3 159 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 LCN1P1Q5VSP4 162 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 ADAM5Q6NVV9 412 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 PSRC1Q6PGN9 363 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 MMD2Q8IY49 270 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 C9orf43Q8TAL5 461 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 SIPA1Q96FS4 1042 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 GBP5Q96PP8 586 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 ASCL2Q99929 193 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 FERMT1Q9BQL6 677 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 OR2B2Q9GZK3 357 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 OR6C2Q9NZP2 312 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 C19orf25Q9UFG5 118 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-206ENST00000489794 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF197O14709 1029 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 EPHB6O15197 1021 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 SNX3O60493 162 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 TRMUO75648 421 aaKnown RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 KRT33AO76009 404 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ACSL3O95573 720 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 PAK4O96013 591 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 PLGP00747 810 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 PENKP01210 267 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 IGLV1-44P01699 117 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 CD48P09326 243 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 CFC1BP0CG36 223 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 CFC1P0CG37 223 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ACAT1P24752 427 aaKnown RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ILF2Q12905 390 aaKnown RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 KIF26BQ2KJY2 2108 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 XKR6Q5GH73 641 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 SPOUT1Q5T280 376 aaKnown RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ARHGAP11AQ6P4F7 1023 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF790Q6PG37 636 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 MOXD1Q6UVY6 613 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 PPP1R21Q6ZMI0 780 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 METTL23Q86XA0 190 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 TIGD4Q8IY51 512 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 KIRREL3Q8IZU9 778 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 WDSUB1Q8N9V3 476 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 DDHD1Q8NEL9 900 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 VANGL1Q8TAA9 524 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 MRGPRDQ8TDS7 321 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 PROX1Q92786 737 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 SPATA17Q96L03 361 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ST6GALNAC4Q9H4F1 302 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF71Q9NQZ8 489 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-206ENST00000489794 POLLQ9UGP5 575 aa5.04□□□□□ -1.6
VPS26A-206ENST00000489794 A0A087WW49 117 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 CASTOR2A6NHX0 329 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 APOHP02749 345 aaPredicted RBP5.03□□□□□ -1.6
VPS26A-206ENST00000489794 CEACAM1P13688 526 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 MAP2K2P36507 400 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 CRIP2P52943 208 aaPredicted RBP5.03□□□□□ -1.6
VPS26A-206ENST00000489794 NAGLUP54802 743 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 CLDN15P56746 228 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 TUBB2AQ13885 445 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 UGCGQ16739 394 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 UGP2Q16851 508 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
VPS26A-206ENST00000489794 OR4A47Q6IF82 309 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 ZNF449Q6P9G9 518 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 GSG1LQ6UXU4 331 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 ABI3BPQ7Z7G0 1075 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 VSIG1Q86XK7 387 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 CCAR2Q8N163 923 aaKnown RBP5.03□□□□□ -1.6
VPS26A-206ENST00000489794 SPATA3Q8NHX4 192 aa5.03□□□□□ -1.6
VPS26A-206ENST00000489794 HCAR2Q8TDS4 363 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms