RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 CDH17Q12864 832 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 PTPRCAPQ14761 206 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 FAM182AQ5T1J6 154 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 CAPRIN2Q6IMN6 1127 aaKnown RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 PWWP2BQ6NUJ5 590 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 C4orf22Q6V702 233 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 CERS6Q6ZMG9 384 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 FAM83HQ6ZRV2 1179 aaPredicted RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 SERPINA9Q86WD7 417 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 AMIGO1Q86WK6 493 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 SPPL2CQ8IUH8 684 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 GPR135Q8IZ08 494 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 FAM71DQ8N9W8 422 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 GSDMBQ8TAX9 411 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 DENND1AQ8TEH3 1009 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 CT55Q8WUE5 264 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 MAIP1Q8WWC4 291 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 CDKN2AIPNLQ96HQ2 116 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 LRFN5Q96NI6 719 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 TFB2MQ9H5Q4 396 aaKnown RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 FAM96AQ9H5X1 160 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 C10orf88Q9H8K7 445 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 COG4Q9H9E3 785 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 ZNF71Q9NQZ8 489 aaPredicted RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 ACSS2Q9NR19 701 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 SMARCAL1Q9NZC9 954 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 GPR160Q9UJ42 338 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 TFR2Q9UP52 801 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 FARSAQ9Y285 508 aaKnown RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 BTRCQ9Y297 605 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 PADI2Q9Y2J8 665 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 PCDHB14Q9Y5E9 798 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 MRFAP1Q9Y605 127 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 PIEZO2Q9H5I5 2752 aa8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
TNRC6B-208ENST00000489500 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 C9J4A7 227 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 GAPDHSO14556 408 aaPredicted RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 PFDN6O15212 129 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 GPR39O43194 453 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 AP2A1O95782 977 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 IGHEP01854 428 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 NTRK1P04629 796 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 MSNP26038 577 aaKnown RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 SHMT2P34897 504 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 PMS2P54278 862 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 RRADP55042 308 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 PRAMEP78395 509 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 NFKB2Q00653 900 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 SPARCL1Q14515 664 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 POU6F1Q14863 301 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 AARS2Q5JTZ9 985 aaKnown RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 TCTN3Q6NUS6 607 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 TTC23LQ6PF05 361 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 HPS6Q86YV9 775 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 APLFQ8IW19 511 aaPredicted RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 RAB42Q8N4Z0 105 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 CCDC89Q8N998 374 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 LRRC57Q8N9N7 239 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ACRBPQ8NEB7 543 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ELMO1Q92556 727 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 TFGQ92734 400 aaPredicted RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 DNAJC1Q96KC8 554 aaKnown RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 RMDN2Q96LZ7 410 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 IP6K3Q96PC2 410 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 FAM118BQ9BPY3 351 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 TRIM4Q9C037 500 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ACTL8Q9H568 366 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 IRAK4Q9NWZ3 460 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 POMT2Q9UKY4 750 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 SNX7Q9UNH6 387 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ZNF148Q9UQR1 794 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 AP1M2Q9Y6Q5 423 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 DUSP10Q9Y6W6 482 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 SPTA1P02549 2419 aa8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 HELZ2Q9BYK8 2649 aaKnown RBP8.56□□□□□ -1.04
TNRC6B-208ENST00000489500 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 IGLV3-16A0A075B6K0 115 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 TRBV5-4A0A0C4DH59 114 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 CCDC78A2IDD5 438 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 SLC9B1P1A6NJY1 282 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 E7EQ34 232 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 LDB2O43679 373 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 RAB40ALP0C0E4 278 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 MSL3P1P0C860 447 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 TPH1P17752 444 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 ADRA1DP25100 572 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 PRDX3P30048 256 aaKnown RBP8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 PGDP52209 483 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 KPNA2P52292 529 aaKnown RBP8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 ITGA1P56199 1179 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 CHRNEQ04844 493 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 KCNAB1Q14722 419 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 TMED2Q15363 201 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 GPR19Q15760 415 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 UGT8Q16880 541 aa8.55□□□□□ -1.04
TNRC6B-208ENST00000489500 FASTKD1Q53R41 847 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms