RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-206	ENST00000489142	DPH2	Q9BQC3	489 aa	Predicted RBP	13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	SELENOS	Q9BQE4	189 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	CCDC68	Q9H2F9	335 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	CLMP	Q9H6B4	373 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	INTS7	Q9NVH2	962 aa	Known RBP	13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	STOX2	Q9P2F5	926 aa	Predicted RBP	13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	IFT80	Q9P2H3	777 aa	Predicted RBP	13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	SLC17A6	Q9P2U8	582 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	FBXO5	Q9UKT4	447 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	SRPK3	Q9UPE1	567 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	VPS9D1	Q9Y2B5	631 aa		13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	PTRH2	Q9Y3E5	179 aa	Known RBP	13.45	□□□□□ -0.26
VTI1A-206	ENST00000489142	MDC1	Q14676	2089 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	ANKRD12	Q6UB98	2062 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	HEATR5B	Q9P2D3	2071 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	NUP210L	Q5VU65	1888 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	LOC105369274	A0A096LPK9	316 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	LOC102723532	A0A0G2JNH3	316 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142		A0A0J9YVX5	310 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	PSIP1	O75475	530 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	MED26	O95402	600 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	SYF2	O95926	243 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	TCP1	P17987	556 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	PGAM1	P18669	254 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	ATP5D	P30049	168 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	CASR	P41180	1078 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	DCD	P81605	110 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	CYP2A13	Q16696	494 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	BBS9	Q3SYG4	887 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	ARMC3	Q5W041	872 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	TCTN3	Q6NUS6	607 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	CPNE9	Q8IYJ1	553 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	OR4N4	Q8N0Y3	316 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	OR2A1	Q8NGT9	310 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	OR9A1P	Q8NGU1	263 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	PROKR1	Q8TCW9	393 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	TRIM51	Q9BSJ1	452 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	SLC25A23	Q9BV35	468 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	SLC6A20	Q9NP91	592 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	SLC22A11	Q9NSA0	550 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	SPATA7	Q9P0W8	599 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	ANAPC2	Q9UJX6	822 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	PADI2	Q9Y2J8	665 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	MRFAP1	Q9Y605	127 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	FAM169A	Q9Y6X4	670 aa		13.44	□□□□□ -0.26
VTI1A-206	ENST00000489142	MYO1C	O00159	1063 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	FANCG	O15287	622 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CAT	P04040	527 aa	Known RBP	13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	EIF2S1	P05198	315 aa	Known RBP	13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	IVD	P26440	423 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	FOLR3	P41439	243 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	GCGR	P47871	477 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CSRP3	P50461	194 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	KLRB1	Q12918	225 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	NKAIN1	Q4KMZ8	207 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	SHISA6	Q6ZSJ9	500 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	MRGPRE	Q86SM8	312 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CREG2	Q8IUH2	290 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	TEX19	Q8NA77	164 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	HMGCLL1	Q8TB92	370 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CD200R1	Q8TD46	325 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	MAGEC3	Q8TD91	643 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CFAP36	Q96G28	342 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	FAM167B	Q9BTA0	163 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	DPH7	Q9BTV6	452 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	SYNPO2L	Q9H987	977 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	CUTC	Q9NTM9	273 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	TAC3	Q9UHF0	121 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	PCYOX1	Q9UHG3	505 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	MAU2	Q9Y6X3	613 aa		13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142	UBR5	O95071	2799 aa	Predicted RBP	13.43	□□□□□ -0.26
VTI1A-206	ENST00000489142		A0A1B0GX78	115 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	SLC16A8	O95907	504 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	UMOD	P07911	640 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	ERG	P11308	486 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	CMPK1	P30085	196 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	RPA3	P35244	121 aa	Predicted RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	OR1D4	P47884	311 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	PGD	P52209	483 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	PGGT1B	P53609	377 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	PNLIPRP1	P54315	467 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	MLLT10	P55197	1068 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	MRPS25	P82663	173 aa	Known RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	TTLL9	Q3SXZ7	439 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	NADK2	Q4G0N4	442 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	WASHC2D	Q5SRD0	308 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	RBM20	Q5T481	1227 aa	Known RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	MRPL14	Q6P1L8	145 aa	Known RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	COX15	Q7KZN9	410 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	RAB43	Q86YS6	212 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	TTC29	Q8NA56	475 aa	Predicted RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	FDCSP	Q8NFU4	85 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	CALML6	Q8TD86	181 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	ANP32B	Q92688	251 aa	Known RBP	13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	DLG3	Q92796	817 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	KCNJ9	Q92806	393 aa		13.42	□□□□□ -0.26
VTI1A-206	ENST00000489142	INPP5D	Q92835	1189 aa		13.42	□□□□□ -0.26

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