RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 KCNMB2Q9Y691 235 aa8.78□□□□□ -1
HDAC6-232ENST00000489053 ZCWPW2A0A1B0GU75 182 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 A0A1B0GX78 115 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ARHGEF33A8MVX0 844 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 TARM1B6A8C7 271 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 KLHL41O60662 606 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 SRPX2O60687 465 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 MATN4O95460 622 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ITGAXP20702 1163 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 MCM3P25205 808 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PEBP1P30086 187 aaKnown RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 RORAP35398 523 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 MAGEA3P43357 314 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CCL11P51671 97 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PGDP52209 483 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PNLIPRP1P54315 467 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 VSX2P58304 361 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 MPP1Q00013 466 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 NFKB2Q00653 900 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ARHGAP19Q14CB8 494 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ZIC1Q15915 447 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CYP2A13Q16696 494 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 NKAIN1Q4KMZ8 207 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 HP1BP3Q5SSJ5 553 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 YOD1Q5VVQ6 348 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 RHBDD2Q6NTF9 364 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 KIAA0408Q6ZU52 694 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ASB18Q6ZVZ8 466 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 NEK10Q6ZWH5 1172 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 MAATS1Q7Z4T9 603 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 GPATCH11Q8N954 259 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 LMNTD1Q8N9Z9 388 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 SLC38A9Q8NBW4 561 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CLEC1AQ8NC01 280 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CERS2Q96G23 380 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PDLIM2Q96JY6 352 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CABS1Q96KC9 395 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 SIGLEC10Q96LC7 697 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 NDNQ99608 321 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 TRIM54Q9BYV2 358 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 FAM60AQ9NP50 221 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 ZFATQ9P243 1243 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 DHCR7Q9UBM7 475 aaKnown RBP8.77□□□□□ -1.01
HDAC6-232ENST00000489053 PYCARDQ9ULZ3 195 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 CHMP2BQ9UQN3 213 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 NEU2Q9Y3R4 380 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 COL6A6A6NMZ7 2263 aa8.77□□□□□ -1.01
HDAC6-232ENST00000489053 A0A0J9YVX5 310 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 EIF3FO00303 357 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TERTO14746 1132 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TTI1O43156 1089 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 PRPF4O43172 522 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 PSIP1O75475 530 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 BANF1O75531 89 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 HAUS5O94927 633 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ALPPP05187 535 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 C8GP07360 202 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 UQCRHP07919 91 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 F7P08709 466 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TPBGLP0DKB5 382 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 MPC1LP0DKB6 136 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 SAT1P21673 171 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 PSMB5P28074 263 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ELK3P41970 407 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CLCN7P51798 805 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ITGA8P53708 1063 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 SLC12A2P55011 1212 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ABATP80404 500 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 OCA2Q04671 838 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 KLRB1Q12918 225 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 IL10RAQ13651 578 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CCSMST1Q4G0I0 132 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF789Q5FWF6 425 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 FAM198BQ6UWH4 519 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 SUSD1Q6UWL2 747 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CREG2Q8IUH2 290 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CPNE9Q8IYJ1 553 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 DNAJC22Q8N4W6 341 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 C2CD4AQ8NCU7 369 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 OR2L3Q8NG85 312 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 HMGCLL1Q8TB92 370 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ALKBH8Q96BT7 664 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 VPS39Q96JC1 886 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 FER1L6-AS2Q96M78 137 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 PKP4Q99569 1192 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ZFYVE21Q9BQ24 234 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TRIM51Q9BSJ1 452 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 AARSD1Q9BTE6 412 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 DPH7Q9BTV6 452 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 SLC25A23Q9BV35 468 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ING2Q9H160 280 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 AKIRIN1Q9H9L7 192 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms