RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SELENOSQ9BQE4 189 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 SLC22A11Q9NSA0 550 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 SNX12Q9UMY4 172 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 PLAAQ9Y263 795 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 MAD1L1Q9Y6D9 718 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 HEATR5BQ9P2D3 2071 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 A6NL46 340 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 CTSVO60911 334 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 PSIP1O75475 530 aaKnown RBP22.05■■□□□ 1.12
COL9A3-213ENST00000489045 ITGAXP20702 1163 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 CLCN7P51798 805 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 TCTE1Q5JU00 501 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 TMEM151BQ8IW70 566 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 PPIL6Q8IXY8 311 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 OR2A1Q8NGT9 310 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 OR9A1PQ8NGU1 263 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 GIMAP7Q8NHV1 300 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 SIGLEC10Q96LC7 697 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 ZNF285Q96NJ3 590 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 IP6K3Q96PC2 410 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 NUDT9Q9BW91 350 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 KCNF1Q9H3M0 494 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 CUTCQ9NTM9 273 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 C20orf96Q9NUD7 363 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-213ENST00000489045 G3BP2Q9UN86 482 aaKnown RBP22.05■■□□□ 1.12
COL9A3-213ENST00000489045 ZNF451Q9Y4E5 1061 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 KLK4Q9Y5K2 254 aa22.05■■□□□ 1.12
COL9A3-213ENST00000489045 DSCR3O14972 297 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 NRP2O60462 931 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 ERGP11308 486 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 SLC1A2P43004 574 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 VSX2P58304 361 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-213ENST00000489045 GRM7Q14831 915 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 PPP1R7Q15435 360 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 LONRF1Q17RB8 773 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 TTLL9Q3SXZ7 439 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 NADK2Q4G0N4 442 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 ZNF549Q6P9A3 640 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 TTC29Q8NA56 475 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-213ENST00000489045 MIB2Q96AX9 1013 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 ACAT2Q9BWD1 397 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 CCDC68Q9H2F9 335 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 FAM114A2Q9NRY5 505 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 TRMT1Q9NXH9 659 aaKnown RBP22.04■■□□□ 1.12
COL9A3-213ENST00000489045 MED16Q9Y2X0 877 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 PCDHGB7Q9Y5F8 929 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 FAM169AQ9Y6X4 670 aa22.04■■□□□ 1.12
COL9A3-213ENST00000489045 MDC1Q14676 2089 aaKnown RBP22.03■■□□□ 1.12
COL9A3-213ENST00000489045 MYO1CO00159 1063 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 CES2O00748 559 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 CATP04040 527 aaKnown RBP22.03■■□□□ 1.12
COL9A3-213ENST00000489045 UMODP07911 640 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 YBX1P67809 324 aaKnown RBP22.03■■□□□ 1.12
COL9A3-213ENST00000489045 CUL1Q13616 776 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 RAPSNQ13702 412 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 RNASEH2BQ5TBB1 312 aaKnown RBP22.03■■□□□ 1.12
COL9A3-213ENST00000489045 YOD1Q5VVQ6 348 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-213ENST00000489045 FRMPD2BQ6IN97 320 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 SPNS2Q8IVW8 549 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 FKBP10Q96AY3 582 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 PTERQ96BW5 349 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 ENAMQ9NRM1 1142 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 GPR83Q9NYM4 423 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 RELNP78509 3460 aa22.03■■□□□ 1.12
COL9A3-213ENST00000489045 LRRK2Q5S007 2527 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 A0A0J9YVX5 310 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 FITM1A5D6W6 292 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 PEX12O00623 359 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 CMPK1P30085 196 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 SUSD1Q6UWL2 747 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 NEK10Q6ZWH5 1172 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 COX15Q7KZN9 410 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 RNF44Q7L0R7 432 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 PPP1R32Q7Z5V6 425 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 LMNTD2Q8IXW0 634 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 METTL27Q8N6F8 245 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-213ENST00000489045 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.02■■□□□ 1.12
COL9A3-213ENST00000489045 CALML6Q8TD86 181 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-213ENST00000489045 SMPDL3AQ92484 453 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 KCNJ9Q92806 393 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 PKP4Q99569 1192 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 SLC6A20Q9NP91 592 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 P4HTMQ9NXG6 502 aa22.02■■□□□ 1.12
COL9A3-213ENST00000489045 OR2A25A4D2G3 310 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 TTLL8A6PVC2 850 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 SRPX2O60687 465 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-213ENST00000489045 ONECUT2O95948 504 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 PIM1P11309 404 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-213ENST00000489045 MPP1Q00013 466 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 TSTA3Q13630 321 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-213ENST00000489045 NAA25Q14CX7 972 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 DCAF10Q5QP82 559 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 WASHC2DQ5SRD0 308 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 OVCH1Q7RTY7 1134 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 DTWD1Q8N5C7 304 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 FER1L6-AS2Q96M78 137 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 FAM167BQ9BTA0 163 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 DPH7Q9BTV6 452 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 DDX47Q9H0S4 455 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms