RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 EEF1AKMT1Q8WVE0 214 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 EXTL1Q92935 676 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 HIST1H2AHQ96KK5 128 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PKP4Q99569 1192 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 HIST1H2AJQ99878 128 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 DPH2Q9BQC3 489 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 WDR83Q9BRX9 315 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 H2AFJQ9BTM1 129 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 NDC1Q9BTX1 674 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 TRIM54Q9BYV2 358 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PLAC1Q9HBJ0 212 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 EURLQ9NYK6 297 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 MOCS1Q9NZB8 636 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 KLHL20Q9Y2M5 609 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PCDHGA6Q9Y5G7 932 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 MDC1Q14676 2089 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 CCDC88CQ9P219 2028 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 NBEAQ8NFP9 2946 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 C9J4A7 227 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SLC16A5O15375 505 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 ZSCAN9O15535 394 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CREG1O75629 220 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 RECKO95980 971 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SAT1P21673 171 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 GRIA3P42263 894 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CCR10P46092 362 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 ARSFP54793 590 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SLC12A2P55011 1212 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CDKN2DP55273 166 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CDC20Q12834 499 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SP140Q13342 867 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 FASTKQ14296 549 aaKnown RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 TBR1Q16650 682 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 THEMIS2Q5TEJ8 643 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 PRAMEF17Q5VTA0 474 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 FAM199XQ6PEV8 388 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 MCATQ8IVS2 390 aaKnown RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 OR2L3Q8NG85 312 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 DLG3Q92796 817 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 LINGO1Q96FE5 620 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 VPS39Q96JC1 886 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 PHACTR1Q9C0D0 580 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SPRTNQ9H040 489 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 MRPS30Q9NP92 439 aaKnown RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 ABCF3Q9NUQ8 709 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 GRHL1Q9NZI5 618 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 SLC17A6Q9P2U8 582 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 GPN3Q9UHW5 284 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 MRPS18BQ9Y676 258 aaKnown RBP13.73□□□□□ -0.21
BRCA1-218ENST00000489037 MGAQ8IWI9 3026 aa13.73□□□□□ -0.21
BRCA1-218ENST00000489037 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SLC16A8O95907 504 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CD63P08962 238 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 RAB40ALP0C0E4 278 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CTAGE8P0CG41 777 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ERGP11308 486 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 F8A1P23610 371 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PSMB5P28074 263 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PTPN4P29074 926 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SSTR1P30872 391 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 GABRA4P48169 554 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ABATP80404 500 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SLC7A5Q01650 507 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ERV3-1Q14264 604 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SUSD1Q6UWL2 747 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 C3orf62Q6ZUJ4 267 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CTAGE4Q8IX94 777 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ZNF655Q8N720 491 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-218ENST00000489037 TTC29Q8NA56 475 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SLC38A9Q8NBW4 561 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PROKR1Q8TCW9 393 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 CCDC138Q96M89 665 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 SELENOSQ9BQE4 189 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 LRRC1Q9BTT6 524 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 DPH7Q9BTV6 452 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ACTL8Q9H568 366 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PARVBQ9HBI1 364 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PCMTD2Q9NV79 361 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 ANKMY1Q9P2S6 941 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 POLHQ9Y253 713 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 COL6A6A6NMZ7 2263 aa13.72□□□□□ -0.21
BRCA1-218ENST00000489037 FAM95CA0A1B0GW59 222 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms