RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CCND1P24385 295 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 GMPRP36959 345 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 GLRBP48167 497 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 LSSP48449 732 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 HNMTP50135 292 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 CDKL1Q00532 357 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 TAP2Q03519 686 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 NAA25Q14CX7 972 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 OR4D1Q15615 310 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 KIF26BQ2KJY2 2108 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 TSNAXIP1Q2TAA8 658 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 CAPN13Q6MZZ7 669 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-219ENST00000488186 UNQ6494/PRO21346Q6UXR6 183 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 ISL2Q96A47 359 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 FBXL8Q96CD0 374 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 PPM1MQ96MI6 270 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 TRAPPC9Q96Q05 1148 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 PCBD2Q9H0N5 130 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
C9orf3-219ENST00000488186 IGSF5Q9NSI5 407 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 PCMTD2Q9NV79 361 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 ARGLU1Q9NWB6 273 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-219ENST00000488186 OCIAD1Q9NX40 245 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 APC2O95996 2303 aa15.18■□□□□ 0.02
C9orf3-219ENST00000488186 FRYQ5TBA9 3013 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 CCDC189A1A4V9 331 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 SUPT3HB4E1H0 165 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 SUPT3HO75486 399 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 RFPL1O75677 317 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 DXOO77932 396 aaKnown RBP15.17■□□□□ 0.02
C9orf3-219ENST00000488186 RBP1P09455 135 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ERGP11308 486 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 CCL4P13236 92 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PVRP15151 417 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ST6GAL1P15907 406 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PSMB5P28074 263 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ACY1Q03154 408 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 DLG1Q12959 904 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 TGFBIQ15582 683 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PPP1R3AQ16821 1122 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ISCA2Q86U28 154 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 FAM20CQ8IXL6 584 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 TCAIMQ8N3R3 496 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 RIBC1Q8N443 379 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-219ENST00000488186 C19orf47Q8N9M1 422 aaKnown RBP15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ACMSDQ8TDX5 336 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PTERQ96BW5 349 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 TCTN2Q96GX1 697 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 TAAR9Q96RI9 348 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PITPNM3Q9BZ71 974 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 CNOT10Q9H9A5 744 aaKnown RBP15.17■□□□□ 0.02
C9orf3-219ENST00000488186 FANCEQ9HB96 536 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 WWOXQ9NZC7 414 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 TAC3Q9UHF0 121 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 PCDHGA8Q9Y5G5 932 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 FREM2Q5SZK8 3169 aa15.17■□□□□ 0.02
C9orf3-219ENST00000488186 ANKRD11Q6UB99 2663 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-219ENST00000488186 EPG5Q9HCE0 2579 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 B4E171 279 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 GOLGA8RI6L899 631 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 POLR1CO15160 346 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-219ENST00000488186 KERAO60938 352 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 PYGBP11216 843 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 FGF3P11487 239 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-219ENST00000488186 ITIH1P19827 911 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 TSPAN7P41732 249 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 MAGEA12P43365 314 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 RAB15P59190 212 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 TBPL1P62380 186 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 ABATP80404 500 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 MC2RQ01718 297 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 RASA2Q15283 850 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 KRT71Q3SY84 523 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 DCAF12Q5T6F0 453 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 PRAMEF13Q5VWM6 474 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 ICE2Q659A1 982 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 SULT1C3Q6IMI6 304 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 FIGLAQ6QHK4 219 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 ADCK2Q7Z695 626 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 CENPLQ8N0S6 344 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-219ENST00000488186 MYRIPQ8NFW9 859 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 OR2L3Q8NG85 312 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 OR2A1Q8NGT9 310 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 RHEBL1Q8TAI7 183 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 ZUFSPQ96AP4 578 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 SLC41A2Q96JW4 573 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 OR6C1Q96RD1 312 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 HAUS8Q9BT25 410 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 B3GNT4Q9C0J1 378 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 NUDT4Q9NZJ9 180 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 SEMA5BQ9P283 1151 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 KLHL20Q9Y2M5 609 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 DYRK1BQ9Y463 629 aa15.16■□□□□ 0.02
C9orf3-219ENST00000488186 A0A1W2PPV9 198 aa15.15■□□□□ 0.02
C9orf3-219ENST00000488186 TARM1B6A8C7 271 aa15.15■□□□□ 0.02
C9orf3-219ENST00000488186 CTIFO43310 598 aaKnown RBP15.15■□□□□ 0.02
C9orf3-219ENST00000488186 PRICKLE3O43900 615 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-219ENST00000488186 EBLN1P0CF75 366 aa15.15■□□□□ 0.02
C9orf3-219ENST00000488186 GFAPP14136 432 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms