RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 G3BP2Q9UN86 482 aaKnown RBP10.84□□□□□ -0.67
NIPAL3-207ENST00000488155 MAU2Q9Y6X3 613 aa10.84□□□□□ -0.67
NIPAL3-207ENST00000488155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 LOC105369274A0A096LPK9 316 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 LOC102723532A0A0G2JNH3 316 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 A0A1W2PPV9 198 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SDR42E2A6NKP2 422 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ARHGEF33A8MVX0 844 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PFDN6O15212 129 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ESR1P03372 595 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 EIF2S1P05198 315 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 UMODP07911 640 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PAMP19021 973 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ITGAXP20702 1163 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 OGNP20774 298 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ARSFP54793 590 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 THOC5Q13769 683 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ANKRD20A4Q4UJ75 823 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ZC3H12BQ5HYM0 836 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 WASHC2DQ5SRD0 308 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 RNF187Q5TA31 235 aaPredicted RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PAPD7Q5XG87 772 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ZNF470Q6ECI4 717 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 FRMPD2BQ6IN97 320 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PPP1R32Q7Z5V6 425 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 CILP2Q8IUL8 1156 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 DENND6AQ8IWF6 608 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 OR4N4Q8N0Y3 316 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SLC35F6Q8N357 371 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 RASGEF1CQ8N431 466 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 RBMXL3Q8N7X1 1067 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 TTC29Q8NA56 475 aaPredicted RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 OR2L3Q8NG85 312 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 OR2Y1Q8NGV0 311 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 COG1Q8WTW3 980 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 DLG3Q92796 817 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 PTERQ96BW5 349 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SERPINB12Q96P63 405 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SLC30A3Q99726 388 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SOX17Q9H6I2 414 aaPredicted RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 SLAMF7Q9NQ25 335 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 ZC3H7BQ9UGR2 993 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 MAD1L1Q9Y6D9 718 aa10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 USP9XQ93008 2570 aaPredicted RBP10.83□□□□□ -0.68
NIPAL3-207ENST00000488155 FAM237BA0A1B0GVD1 139 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 A0A1B0GX78 115 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 H3BMM5 538 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 DSCR3O14972 297 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 KIF5CO60282 957 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 DPM1O60762 260 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 VPS4BO75351 444 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MED26O95402 600 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MATN4O95460 622 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 SYF2O95926 243 aaKnown RBP10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 GNLYP22749 145 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 CCNFP41002 786 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MAGEA6P43360 314 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 GCGRP47871 477 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MPP1Q00013 466 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 GRM7Q14831 915 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 CYP2A13Q16696 494 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 DCAF10Q5QP82 559 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 JMJD6Q6NYC1 403 aaPredicted RBP10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 PRSS58Q8IYP2 241 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 AGGF1Q8N302 714 aaeCLIP10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 GALNT16Q8N428 558 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 OR2A1Q8NGT9 310 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 OR9A1PQ8NGU1 263 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MAGEC3Q8TD91 643 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 ZUFSPQ96AP4 578 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 FER1L6-AS2Q96M78 137 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 TCF12Q99081 682 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 DPH7Q9BTV6 452 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 CCDC68Q9H2F9 335 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 TRMT1Q9NXH9 659 aaKnown RBP10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 ANKMY1Q9P2S6 941 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 CDC23Q9UJX2 597 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 VPS4AQ9UN37 437 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 MRFAP1Q9Y605 127 aa10.82□□□□□ -0.68
NIPAL3-207ENST00000488155 PCNX1Q96RV3 2341 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 GTF3C1Q12789 2109 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 ZCWPW2A0A1B0GU75 182 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 HYKKA2RU49 373 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 TARM1B6A8C7 271 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 PGRMC1O00264 195 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 FFAR3O14843 346 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 GPR42O15529 346 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 BANF1O75531 89 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 USP1O94782 785 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 CD63P08962 238 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 ITGA3P26006 1051 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 CMPK1P30085 196 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 RPA3P35244 121 aaPredicted RBP10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 SLC1A2P43004 574 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 CD97P48960 835 aa10.81□□□□□ -0.68
NIPAL3-207ENST00000488155 CLCN7P51798 805 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms