RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 TRPV4Q9HBA0 871 aa3.14□□□□□ -1.91
CCDC66-221ENST00000487739 PTGES3LE9PB15 166 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 PHOX2AO14813 284 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 PRKAR1AP10644 381 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 OXTRP30559 389 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 PSMB10P40306 273 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 MTHFRP42898 656 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 XGP55808 180 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 ARF3P61204 181 aaPredicted RBP3.13□□□□□ -1.91
CCDC66-221ENST00000487739 ARF1P84077 181 aaKnown RBP3.13□□□□□ -1.91
CCDC66-221ENST00000487739 CA9Q16790 459 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 SYT14P1Q58G82 188 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 KRT79Q5XKE5 535 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 C11orf63Q6NUN7 778 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 ZNF841Q6ZN19 808 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 SLC25A42Q86VD7 318 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 ZFAND4Q86XD8 727 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 NPRL2Q8WTW4 380 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 ATXN7L3BQ96GX2 97 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 MS4A10Q96PG2 267 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 LPAR4Q99677 370 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 MTMR12Q9C0I1 747 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 NYXQ9GZU5 481 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 OSGEPL1Q9H4B0 414 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 DPP3Q9NY33 737 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 STK26Q9P289 416 aa3.13□□□□□ -1.91
CCDC66-221ENST00000487739 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
CCDC66-221ENST00000487739 TMEM221A6NGB7 291 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 CEACAM4O75871 244 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 RPL35AP18077 110 aaKnown RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 PTPN3P26045 913 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 PDHA2P29803 388 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 IRX4P78413 519 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 MAT1AQ00266 395 aaKnown RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 FCHO2Q0JRZ9 810 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 CDH18Q13634 790 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 RNF212Q495C1 297 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 HSP90AB4PQ58FF6 505 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 RAB41Q5JT25 222 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 TEX38Q6PEX7 206 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 LEKR1Q6ZMV7 388 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 ZER1Q7Z7L7 766 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 C1orf147Q96MC9 270 aaPredicted RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 FAM20AQ96MK3 541 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 CDRT15Q96T59 188 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 PSMB7Q99436 277 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 PAFAH2Q99487 392 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 OLFM1Q99784 485 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 OVOL2Q9BRP0 275 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 KIFC3Q9BVG8 833 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 TDRD1Q9BXT4 1180 aaKnown RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 MAK16Q9BXY0 300 aaKnown RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 TUBB1Q9H4B7 451 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 HEXA-AS1Q9H8Q6 139 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 GPN1Q9HCN4 374 aaPredicted RBP3.12□□□□□ -1.91
CCDC66-221ENST00000487739 Q9N2K0 584 aa3.12□□□□□ -1.91
CCDC66-221ENST00000487739 TEX28O15482 410 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 POP4O95707 220 aaKnown RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 MELTFP08582 738 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 GP9P14770 177 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 PTGER4P35408 488 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 DCAF7P61962 342 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 TAB1Q15750 504 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 UGT3A2Q3SY77 523 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 FAAH2Q6GMR7 532 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 LCLAT1Q6UWP7 414 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 CDHR3Q6ZTQ4 885 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 CHMP1BQ7LBR1 199 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 KCNMB4Q86W47 210 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 FAM131BQ86XD5 332 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 SLC37A3Q8NCC5 494 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 OR5T2Q8NGG2 359 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 HDAC2Q92769 488 aaKnown RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 EVI5LQ96CN4 794 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 C4orf45Q96LM5 186 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 MAP3K3Q99759 626 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 ZNF577Q9BSK1 485 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 WNT5BQ9H1J7 359 aa3.11□□□□□ -1.91
CCDC66-221ENST00000487739 WSB2Q9NYS7 404 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 SUCLA2Q9P2R7 463 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 PA2G4Q9UQ80 394 aaKnown RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 WBP11Q9Y2W2 641 aaKnown RBP3.11□□□□□ -1.91
CCDC66-221ENST00000487739 FEZF1A0PJY2 475 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 OR2A25A4D2G3 310 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 O00370 1275 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 CTDSP2O14595 271 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 AP3D1O14617 1153 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 MEIS2O14770 477 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 VILLO15195 856 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 RTL8CO15255 209 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 GPRIN2O60269 458 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 ERAL1O75616 437 aaKnown RBP3.1□□□□□ -1.91
CCDC66-221ENST00000487739 KRT33AO76009 404 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 SMIM18P0DKX4 95 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 HAPLN1P10915 354 aaPredicted RBP3.1□□□□□ -1.91
CCDC66-221ENST00000487739 KLC1Q07866 573 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 CD300CQ08708 224 aa3.1□□□□□ -1.91
CCDC66-221ENST00000487739 RNASEH2BQ5TBB1 312 aaKnown RBP3.1□□□□□ -1.91
CCDC66-221ENST00000487739 ARHGAP22Q7Z5H3 698 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms