RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 TRPV4Q9HBA0 871 aa2.84□□□□□ -1.95
RBM39-234ENST00000487604 GKN1Q9NS71 199 aa2.84□□□□□ -1.95
RBM39-234ENST00000487604 CTSZQ9UBR2 303 aa2.84□□□□□ -1.95
RBM39-234ENST00000487604 B4DLN1 442 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 VILLO15195 856 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 TOMM70O94826 608 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 HOXD4P09016 255 aaPredicted RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 GP9P14770 177 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 GJA1P17302 382 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 TRIM21P19474 475 aaKnown RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 PDHA2P29803 388 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 MRPL12P52815 198 aaKnown RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 DCAF7P61962 342 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 EXT1Q16394 746 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 UGT3A2Q3SY77 523 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 LEKR1Q6ZMV7 388 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 TMEM173Q86WV6 379 aaPredicted RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 EXD1Q8NHP7 514 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 TOMM40LQ969M1 308 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 FAM218AQ96MZ4 157 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 PAFAH2Q99487 392 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 OVOL2Q9BRP0 275 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 HOXD1Q9GZZ0 328 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 OSGEPL1Q9H4B0 414 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 B3GAT2Q9NPZ5 323 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 SUCLA2Q9P2R7 463 aaPredicted RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 C19orf25Q9UFG5 118 aaPredicted RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 WBP11Q9Y2W2 641 aaKnown RBP2.83□□□□□ -1.96
RBM39-234ENST00000487604 WIPI2Q9Y4P8 454 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 HCFC1P51610 2035 aa2.83□□□□□ -1.96
RBM39-234ENST00000487604 SNURFLB1AK76 121 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 H0YAE9 185 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 CTDSP2O14595 271 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 TFECO14948 347 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 ADAMDEC1O15204 470 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 CEACAM4O75871 244 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 PIK3R1P27986 724 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 PSMB10P40306 273 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 ETV5P41161 510 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 SOX3P41225 446 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 ZFP36L2P47974 494 aaKnown RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 ARF3P61204 181 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 ARF1P84077 181 aaKnown RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 IGSF11Q5DX21 431 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 CCDC30Q5VVM6 783 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 NOTUMQ6P988 496 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 ZFAND4Q86XD8 727 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 PTPMT1Q8WUK0 201 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 PIGBQ92521 554 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 HDAC2Q92769 488 aaKnown RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 CNRIP1Q96F85 164 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 C1orf147Q96MC9 270 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 LPAR4Q99677 370 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 WNT5BQ9H1J7 359 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 CHST11Q9NPF2 352 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.82□□□□□ -1.96
RBM39-234ENST00000487604 PSD3Q9NYI0 1048 aa2.82□□□□□ -1.96
RBM39-234ENST00000487604 THAP10Q9P2Z0 257 aaPredicted RBP2.82□□□□□ -1.96
RBM39-234ENST00000487604 MEIS2O14770 477 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 MELTFP08582 738 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 RPL35AP18077 110 aaKnown RBP2.81□□□□□ -1.96
RBM39-234ENST00000487604 CAPGP40121 348 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 MTHFRP42898 656 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 CDH18Q13634 790 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 TAB1Q15750 504 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 C11orf63Q6NUN7 778 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 ZNF841Q6ZN19 808 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
RBM39-234ENST00000487604 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 SLC37A3Q8NCC5 494 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 NPRL2Q8WTW4 380 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 C4orf45Q96LM5 186 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 MS4A10Q96PG2 267 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 LGMNQ99538 433 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 MAP3K3Q99759 626 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 CCDC3Q9BQI4 270 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 TUBB1Q9H4B7 451 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 TLE6Q9H808 572 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 HEXA-AS1Q9H8Q6 139 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 TMED3Q9Y3Q3 217 aa2.81□□□□□ -1.96
RBM39-234ENST00000487604 ZNF646O15015 1829 aaPredicted RBP2.8□□□□□ -1.96
RBM39-234ENST00000487604 GPR75-ASB3A0A0A6YYF3 556 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 SHISA9B4DS77 424 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 AP3D1O14617 1153 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 FPGTO14772 594 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 RTL8CO15255 209 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 TEX28O15482 410 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 EPB41L2O43491 1005 aaKnown RBP2.8□□□□□ -1.96
RBM39-234ENST00000487604 GPRIN2O60269 458 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 POP4O95707 220 aaKnown RBP2.8□□□□□ -1.96
RBM39-234ENST00000487604 BCL10O95999 233 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 IGHV2-70P01814 119 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 DANCRP0C864 163 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 HAPLN1P10915 354 aaPredicted RBP2.8□□□□□ -1.96
RBM39-234ENST00000487604 GP1BBP13224 206 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 CDH13P55290 713 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 PLEKHS1Q5SXH7 462 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 FAAH2Q6GMR7 532 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 TMEM211Q6ICI0 200 aa2.8□□□□□ -1.96
RBM39-234ENST00000487604 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms