RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ADRA1DP25100 572 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 GJB2P29033 226 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CA5AP35218 305 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 TSPAN7P41732 249 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 STT3AP46977 705 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PRIM2P49643 509 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
CNN3-206ENST00000487539 CFHR3Q02985 330 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PPARDQ03181 441 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 FOXM1Q08050 763 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 DLG2Q15700 870 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 EDRF1Q3B7T1 1238 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 ACCSLQ4AC99 568 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 VWA2Q5GFL6 755 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 MTX3Q5HYI7 312 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 NEK5Q6P3R8 708 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 TMEM65Q6PI78 240 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 SCARA5Q6ZMJ2 495 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 TRAPPC11Q7Z392 1133 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 KRT73Q86Y46 540 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
CNN3-206ENST00000487539 GALNT16Q8N428 558 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 FBXL16Q8N461 479 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 C11orf44Q8N8P7 122 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 OR52K2Q8NGK3 314 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 UBE2Q2Q8WVN8 375 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PATE1Q8WXA2 126 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 OR8D1Q8WZ84 308 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CENPTQ96BT3 561 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 C14orf79Q96F83 325 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 SPAG5Q96R06 1193 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 EFHD1Q9BUP0 239 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 SELENOOQ9BVL4 669 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 EDEM3Q9BZQ6 932 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 ING2Q9H160 280 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 ZHX3Q9H4I2 956 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 ZBTB20Q9HC78 741 aaPredicted RBP4.29□□□□□ -1.72
CNN3-206ENST00000487539 ASIC5Q9NY37 505 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CLIC5Q9NZA1 410 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 XPO7Q9UIA9 1087 aaKnown RBP4.29□□□□□ -1.72
CNN3-206ENST00000487539 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CEP83Q9Y592 693 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 CSAG2Q9Y5P2 127 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 FADS3Q9Y5Q0 445 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PIKFYVEQ9Y2I7 2098 aa4.29□□□□□ -1.72
CNN3-206ENST00000487539 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 RNF212BA8MTL3 300 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 FPGTO14772 594 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 APOL1O14791 398 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 MCF2LO15068 1137 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 PMM2O15305 246 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 DPM1O60762 260 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 COQ9O75208 318 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 WISP2O76076 250 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 SIX3O95343 332 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 KRT18P05783 430 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 STSP08842 583 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 TRIM49P0CI25 452 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 TRIM49CP0CI26 452 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 THRAP10827 490 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 APEHP13798 732 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 PDGFRAP16234 1089 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ZNF18P17022 549 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 MPGP29372 298 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ATICP31939 592 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CHRNA3P32297 505 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 DDIT3P35638 169 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 GNALP38405 381 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ZNF131P52739 623 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 DGKQP52824 942 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 KCNK10P57789 538 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 POU5F1Q01860 360 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 LARS2Q15031 903 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 CEBPEQ15744 281 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CHRNA6Q15825 494 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CEP78Q5JTW2 689 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CCDC181Q5TID7 509 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 FAM46CQ5VWP2 391 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 RRAGBQ5VZM2 374 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ANKRD40Q6AI12 368 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 SLC18B1Q6NT16 456 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 MRNIPQ6NTE8 343 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 FAM199XQ6PEV8 388 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 BLOC1S2Q6QNY1 142 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ZNF813Q6ZN06 617 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 DCDC5Q6ZRR9 648 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 NCCRP1Q6ZVX7 275 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 ERN2Q76MJ5 926 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 CCDC186Q7Z3E2 898 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 YTHDF3Q7Z739 585 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 VPS36Q86VN1 386 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 GPBP1Q86WP2 473 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CBWD2Q8IUF1 395 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 LIX1LQ8IVB5 337 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 IQCKQ8N0W5 287 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms