RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ANXA5P08758 320 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 MAGP20916 626 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 IMPA1P29218 277 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 ITGA1P56199 1179 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TBPL1P62380 186 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TAP2Q03519 686 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 RELAQ04206 551 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TSTA3Q13630 321 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-205ENST00000487150 ZNF460Q14592 562 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 FAM83EQ2M2I3 478 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 MROH9Q5TGP6 573 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 PRAMEF13Q5VWM6 474 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 WDR93Q6P2C0 686 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TMEM126BQ8IUX1 230 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 NLGN4XQ8N0W4 816 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 NLGN4YQ8NFZ3 816 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-205ENST00000487150 OR2A1Q8NGT9 310 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 KIAA1143Q96AT1 154 aaPredicted RBP14.1□□□□□ -0.15
LIMS3-205ENST00000487150 TSNARE1Q96NA8 513 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 MIPEPQ99797 713 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 SLC7A5P2Q9GIP4 190 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 CNOT10Q9H9A5 744 aaKnown RBP14.1□□□□□ -0.15
LIMS3-205ENST00000487150 NMRAL1Q9HBL8 299 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 PLCL2Q9UPR0 1127 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 ACOT9Q9Y305 439 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 PCDHB3Q9Y5E6 796 aa14.1□□□□□ -0.15
LIMS3-205ENST00000487150 A0A1W2PPV9 198 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 NPEPPSL1A6NEC2 478 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 SYCE1LA8MT33 242 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TMEM150CB9EJG8 249 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 E7EQ34 232 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PHGDHO43175 533 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TLX3O43711 291 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PRICKLE3O43900 615 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 IPO13O94829 963 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 WISP3O95389 354 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 LTA4HP09960 611 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PVRP15151 417 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 EZRP15311 586 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TYK2P29597 1187 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PRDX1Q06830 199 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PHKG1Q16816 387 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PPP1R3AQ16821 1122 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TCTE1Q5JU00 501 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 ICE2Q659A1 982 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TLDC1Q6P9B6 456 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 EMBQ6PCB8 327 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 FIGLAQ6QHK4 219 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 AGTRAPQ6RW13 159 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 SBSNQ6UWP8 590 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 C2orf73Q8N5S3 287 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TBC1D19Q8N5T2 526 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 STAG3L4Q8TBR4 150 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 ZNF501Q96CX3 271 aaPredicted RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
LIMS3-205ENST00000487150 MED8Q96G25 268 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 UBXN10Q96LJ8 280 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 PPM1MQ96MI6 270 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 CTRCQ99895 268 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 EGFL8Q99944 293 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 C17orf62Q9BQA9 187 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TXLNGYQ9BZA5 131 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 ANKZF1Q9H8Y5 726 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 CAB39LQ9H9S4 337 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 IRAK4Q9NWZ3 460 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 TAC3Q9UHF0 121 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 ADAMTS6Q9UKP5 1117 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 SNX7Q9UNH6 387 aa14.09□□□□□ -0.15
LIMS3-205ENST00000487150 IQANK1A0A1B0GTG1 560 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 KLK10O43240 276 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 RAD1O60671 282 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 SRPX2O60687 465 aaPredicted RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 SCRG1O75711 98 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 FAM155BO75949 473 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 DLGAP3O95886 979 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 SNRPAP09012 282 aaKnown RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 SLC35E2BP0CK96 405 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 GRK3P35626 688 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 GRIA3P42263 894 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 CSHL1Q14406 222 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 YOD1Q5VVQ6 348 aaPredicted RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 TMEM207Q6UWW9 146 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 C6orf15Q6UXA7 325 aaPredicted RBP14.08□□□□□ -0.16
LIMS3-205ENST00000487150 CDHR3Q6ZTQ4 885 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 LCA5Q86VQ0 697 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 C17orf64Q86WR6 236 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 DTX1Q86Y01 620 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 GPSM1Q86YR5 675 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 IL22RA1Q8N6P7 574 aa14.08□□□□□ -0.16
LIMS3-205ENST00000487150 DLG3Q92796 817 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms