RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 CBSLP0DN79 551 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 CASQ1P31415 396 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 CBSP35520 551 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 HSD17B2P37059 387 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 FOLR3P41439 243 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ELK3P41970 407 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 RGS4P49798 205 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 NFKB2Q00653 900 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 CYP2A13Q16696 494 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 TCTE1Q5JU00 501 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ZNF549Q6P9A3 640 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 FIGLAQ6QHK4 219 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 RAB43Q86YS6 212 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 MCATQ8IVS2 390 aaKnown RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 PALM2Q8IXS6 379 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 DNAJC22Q8N4W6 341 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 CD200R1Q8TD46 325 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 LRRC39Q96DD0 335 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 DHRS4Q9BTZ2 278 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ACAT2Q9BWD1 397 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ZNF71Q9NQZ8 489 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 ABCF3Q9NUQ8 709 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 DHCR7Q9UBM7 475 aaKnown RBP12.38□□□□□ -0.43
CHMP3-208ENST00000486404 TCFL5Q9UL49 500 aa12.38□□□□□ -0.43
CHMP3-208ENST00000486404 SEC16AO15027 2179 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 A0A1B0GX78 115 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ARGFXA6NJG6 315 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 J3QKU1 62 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 EIF3FO00303 357 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 HCRTR1O43613 425 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ZBTB14O43829 449 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 HAUS5O94927 633 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 CD63P08962 238 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 MCM3P25205 808 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 GRIA3P42263 894 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 GABRA4P48169 554 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 CARSP49589 748 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 PNLIPRP1P54315 467 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ARSFP54793 590 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 DCDP81605 110 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 GRM7Q14831 915 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ARHGAP19Q14CB8 494 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 MLIPQ5VWP3 458 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 FCRL6Q6DN72 434 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 LCN10Q6JVE6 187 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 HIBCHQ6NVY1 386 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 UBE2R2Q712K3 238 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ADCK2Q7Z695 626 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 CNTN4Q8IWV2 1026 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 MYO1HQ8N1T3 1032 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 GPATCH11Q8N954 259 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ZUFSPQ96AP4 578 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ABHD17AQ96GS6 310 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 PKP4Q99569 1192 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 MRPS30Q9NP92 439 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ACSS2Q9NR19 701 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 UTP6Q9NYH9 597 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 TAS2R13Q9NYV9 303 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 TAC3Q9UHF0 121 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 G3BP2Q9UN86 482 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 DHRS7Q9Y394 339 aa12.37□□□□□ -0.43
CHMP3-208ENST00000486404 TNRC6AQ8NDV7 1962 aaKnown RBP12.37□□□□□ -0.43
CHMP3-208ENST00000486404 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 TARM1B6A8C7 271 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 SLC16A8O95907 504 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 CTSBP07858 339 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ERGP11308 486 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ALAS2P22557 587 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 IVDP26440 423 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 OTX2P32243 289 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 VSX2P58304 361 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 PDIA2Q13087 525 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 FASTKQ14296 549 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 FAM69BQ5VUD6 431 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 YOD1Q5VVQ6 348 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ZNF385CQ66K41 422 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 CPZQ66K79 652 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 SUSD1Q6UWL2 747 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ATG14Q6ZNE5 492 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 TTLL10Q6ZVT0 673 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 PTRH1Q86Y79 214 aaKnown RBP12.36□□□□□ -0.43
CHMP3-208ENST00000486404 ANKMY2Q8IV38 441 aa12.36□□□□□ -0.43
CHMP3-208ENST00000486404 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms