RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 RAB10P61026 200 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 TMPRSS15P98073 1019 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CDC20Q12834 499 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 TMEM115Q12893 351 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 STX3Q13277 289 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 PEX6Q13608 980 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 GPR18Q14330 331 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 USP10Q14694 798 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 KCNAB1Q14722 419 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 KIR2DS5Q14953 304 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ZKSCAN8Q15776 578 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 DUS1LQ6P1R4 473 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CEACAM20Q6UY09 585 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CDHR3Q6ZTQ4 885 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM47EQ6ZV65 393 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 OTOAQ7RTW8 1153 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 LRRTM4Q86VH4 590 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 PHYKPLQ8IUZ5 450 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 RASGEF1AQ8N9B8 481 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CCDC63Q8NA47 563 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ARMC2Q8NEN0 867 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 STARD8Q92502 1023 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ABHD17AQ96GS6 310 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 PPM1MQ96MI6 270 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ZNF778Q96MU6 729 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 OR6C1Q96RD1 312 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 DPYSL5Q9BPU6 564 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 POPDC3Q9HBV1 291 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 IL26Q9NPH9 171 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 INTS10Q9NVR2 710 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 NLE1Q9NVX2 485 aaPredicted RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CROTQ9UKG9 612 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 MTO1Q9Y2Z2 717 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 ACOT9Q9Y305 439 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 KCTD3Q9Y597 815 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CFAP20Q9Y6A4 193 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 RELNP78509 3460 aa9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 TNRC6AQ8NDV7 1962 aaKnown RBP9.13□□□□□ -0.95
TMEM39A-208ENST00000486159 CREBBPQ92793 2442 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 IGHV5-51A0A0C4DH38 117 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 LILRA5A6NI73 299 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 OR2AG2A6NM03 316 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 TMEM114B3SHH9 223 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 KMOO15229 486 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SNNO75324 88 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 PDGFAP04085 211 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CPA3P15088 417 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 BGNP21810 368 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 LPOP22079 712 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 PBLDP30039 288 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 DLSTP36957 453 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 STAT5AP42229 794 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SKIV2L2P42285 1042 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC1A2P43004 574 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CCR10P46092 362 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 HK2P52789 917 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 EPHA4P54764 986 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 RAB15P59190 212 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 DCDC1P59894 354 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 ERV3-1Q14264 604 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 NFE2L1Q14494 772 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FASTKD1Q53R41 847 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM69BQ5VUD6 431 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM45BPQ6NSW5 357 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CGB2Q6NT52 195 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 IRGCQ6NXR0 463 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM199XQ6PEV8 388 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 AFTPHQ6ULP2 937 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 ABRAXAS1Q6UWZ7 409 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM151BQ6UXP7 276 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 RAPH1Q70E73 1250 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 DET1Q7L5Y6 550 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CRLF3Q8IUI8 442 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CILP2Q8IUL8 1156 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 TRAPPC5Q8IUR0 188 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 RAVER1Q8IY67 606 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 KIRREL3Q8IZU9 778 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 LILRA3Q8N6C8 439 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 OR13J1Q8NGT2 312 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 PPP1R14CQ8TAE6 165 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM45AQ8TCE6 357 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SH3KBP1Q96B97 665 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 CCDC126Q96EE4 140 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 ZSCAN5AQ9BUG6 496 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 ULBP3Q9BZM4 244 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 STN1Q9H668 368 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 NMRAL1Q9HBL8 299 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 COPG2Q9UBF2 871 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
TMEM39A-208ENST00000486159 SLC2A6Q9UGQ3 507 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms