RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 VASH2Q86V25 355 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 FAM20CQ8IXL6 584 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 SYTL1Q8IYJ3 562 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 DNAJC22Q8N4W6 341 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 NKAPQ8N5F7 415 aaKnown RBP11.99□□□□□ -0.49
HMG20B-211ENST00000486028 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 ZSCAN1Q8NBB4 408 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 ZUFSPQ96AP4 578 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 TSPAN17Q96FV3 270 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 PDLIM5Q96HC4 596 aaKnown RBP11.99□□□□□ -0.49
HMG20B-211ENST00000486028 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 FMO2Q99518 471 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 MIPEPQ99797 713 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 MCMBPQ9BTE3 642 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 SLC12A9Q9BXP2 914 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 TRIM54Q9BYV2 358 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 PRORYQ9H606 182 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 FAM60AQ9NP50 221 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 PADI1Q9ULC6 663 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 PLCL2Q9UPR0 1127 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 SDK2Q58EX2 2172 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
HMG20B-211ENST00000486028 LAMA5O15230 3695 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 A0A1W2PPV9 198 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 POM121CA8CG34 1229 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 K7ENP7 123 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 SCRG1O75711 98 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 CCNDBP1O95273 360 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 TIAF1O95411 115 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 TSPAN12O95859 305 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 NTRK1P04629 796 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 MAGP20916 626 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 CMPK1P30085 196 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 GRIA3P42263 894 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 ITGA1P56199 1179 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 TSTA3Q13630 321 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 USP10Q14694 798 aaKnown RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 KBTBD12Q3ZCT8 623 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 ZC3H12BQ5HYM0 836 aaKnown RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 KIAA1614Q5VZ46 1190 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 INO80CQ6PI98 192 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 GPR155Q7Z3F1 870 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 GPR135Q8IZ08 494 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 OR2L3Q8NG85 312 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 OR2A1Q8NGT9 310 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 OR1L3Q8NH93 324 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 ZNF480Q8WV37 535 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 EFHD1Q9BUP0 239 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 POPDC3Q9HBV1 291 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 CPNE5Q9HCH3 593 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 ADAMTS6Q9UKP5 1117 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 PDE10AQ9Y233 779 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 KLHL20Q9Y2M5 609 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 MTO1Q9Y2Z2 717 aaKnown RBP11.98□□□□□ -0.49
HMG20B-211ENST00000486028 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 CHD6Q8TD26 2715 aa11.98□□□□□ -0.49
HMG20B-211ENST00000486028 CFAP47Q6ZTR5 3102 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 E7ENX8 843 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 E7EQ34 232 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 EFSO43281 561 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 OR2B3O76000 313 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 C1QAP02745 245 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 KLK3P07288 261 aaPredicted RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 RHOXF2BP0C7M4 288 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 LIFP15018 202 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 ZNF37AP17032 561 aaPredicted RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 PSMB5P28074 263 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 STAT5AP42229 794 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 PGGT1BP53609 377 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 TAP2Q03519 686 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 ARHGAP40Q5TG30 622 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 SUSD1Q6UWL2 747 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 TMEM207Q6UWW9 146 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 MCATQ8IVS2 390 aaKnown RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 DLG3Q92796 817 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 RNF31Q96EP0 1072 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 CYTH2Q99418 400 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 GPR22Q99680 433 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 RBBP8Q99708 897 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 ACAT2Q9BWD1 397 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 SLC7A5P2Q9GIP4 190 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 GPN2Q9H9Y4 310 aaPredicted RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 GPAMQ9HCL2 828 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 UTP6Q9NYH9 597 aaKnown RBP11.97□□□□□ -0.49
HMG20B-211ENST00000486028 NINJ2Q9NZG7 142 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 KLK4Q9Y5K2 254 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 AP1M2Q9Y6Q5 423 aa11.97□□□□□ -0.49
HMG20B-211ENST00000486028 ZFYVE26Q68DK2 2539 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms