RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 LCP2Q13094 533 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 RIN1Q13671 783 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 HERC3Q15034 1050 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 C3orf36Q3SXR2 165 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 USH1GQ495M9 461 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 FAM98BQ52LJ0 330 aaKnown RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CT83Q5H943 113 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 TMTC4Q5T4D3 741 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 LRRC38Q5VT99 294 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 RAET1GQ6H3X3 334 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 ESRP1Q6NXG1 681 aaKnown RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 PMF1Q6P1K2 205 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 VSTM1Q6UX27 236 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CHST9Q7L1S5 443 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 KBTBD6Q86V97 674 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 LRRC6Q86X45 466 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CFAP206Q8IYR0 622 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CRYBG2Q8N1P7 616 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 D2HGDHQ8N465 521 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC15A4Q8N697 577 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 MAB21L3Q8N8X9 362 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 ICA1LQ8NDH6 482 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 TMEM161BQ8NDZ6 487 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 FBXL13Q8NEE6 735 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 OR52J3Q8NH60 311 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 POC1BQ8TC44 478 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CKAP2Q8WWK9 683 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 PIGKQ92643 395 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 PPP2R3CQ969Q6 453 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 ISG20Q96AZ6 181 aaKnown RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 RHBDF1Q96CC6 855 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SAT2Q96F10 170 aaPredicted RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 MAGED4Q96JG8 741 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SNX27Q96L92 541 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 C16orf92Q96LL3 132 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SAMD8Q96LT4 415 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 MAGEB18Q96M61 343 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 NSMCE2Q96MF7 247 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 TSNARE1Q96NA8 513 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 FCRL4Q96PJ5 515 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 C19orf43Q9BQ61 176 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CBWD1Q9BRT8 395 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC25A23Q9BV35 468 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 TINAGL1Q9GZM7 467 aaPredicted RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 HDHD2Q9H0R4 259 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 VCX2Q9H322 139 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CDC42EP4Q9H3Q1 356 aaKnown RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 MVB12BQ9H7P6 319 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 EBF2Q9HAK2 575 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 NTN4Q9HB63 628 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 IL37Q9NZH6 218 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 SAE1Q9UBE0 346 aaPredicted RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 OSGIN1Q9UJX0 560 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 FBXW2Q9UKT8 454 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 TRPC5Q9UL62 973 aaPredicted RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 CNTN6Q9UQ52 1028 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 HBS1LQ9Y450 684 aaKnown RBP3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 MAD1L1Q9Y6D9 718 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 STYXL1Q9Y6J8 313 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 PSME4Q14997 1843 aa3.94□□□□□ -1.78
PRPF38B-205ENST00000485810 ASTN2O75129 1339 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 SCN9AQ15858 1988 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 TMEM221A6NGB7 291 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 OOEPA6NGQ2 149 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 NPIPB15A6NHN6 443 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ANKRD63C9JTQ0 380 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 GOLGA8RI6L899 631 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PSMD11O00231 422 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 TRAFD1O14545 582 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 BCAT2O15382 392 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 SSX5O60225 188 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 CRCPO75575 148 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 SUN1O94901 812 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PROSCO94903 275 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 C22orf31O95567 290 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 CH25HO95992 272 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 GAS8O95995 478 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PIGRP01833 764 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 MT-ND5P03915 603 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 YES1P07947 543 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 NQO1P15559 274 aaKnown RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 EN2P19622 333 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 EDNRBP24530 442 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ADRA1DP25100 572 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ACRV1P26436 265 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 KLRC2P26717 231 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PTPN4P29074 926 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 YWHABP31946 246 aaKnown RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ARL1P40616 181 aaPredicted RBP3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ALDH3B1P43353 468 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 ACADSBP45954 432 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 CDKN1BP46527 198 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 POU3F4P49335 361 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 RGS19P49795 217 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 CDH8P55286 799 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 NCALDP61601 193 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 PSMC5P62195 406 aa3.93□□□□□ -1.78
PRPF38B-205ENST00000485810 POLR2GP62487 172 aaKnown RBP eCLIP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms