RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 DNAJC11Q9NVH1 559 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ACTR10Q9NZ32 417 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 OPTCQ9UBM4 332 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 SLC22A14Q9Y267 594 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 PCDHB11Q9Y5F2 797 aa16.98■□□□□ 0.31
CHMP3-207ENST00000485465 ZFHX2Q9C0A1 2572 aaPredicted RBP16.97■□□□□ 0.31
CHMP3-207ENST00000485465 GSAPA4D1B5 854 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 ISM1B1AKI9 464 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 MATN2O00339 956 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 E2F3O00716 465 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 DUX1O43812 170 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 GP1BAP07359 652 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 NPPBP16860 134 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 PPM1FP49593 454 aaPredicted RBP16.97■□□□□ 0.31
CHMP3-207ENST00000485465 CCL7P80098 99 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 SQSTM1Q13501 440 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 AMZ1Q400G9 498 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 THEMIS2Q5TEJ8 643 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 PRAMEF13Q5VWM6 474 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 LCTLQ6UWM7 567 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 CCNYL1Q8N7R7 359 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 SNX31Q8N9S9 440 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 OR2A1Q8NGT9 310 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 FLVCR1-AS1Q8TAF5 88 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 FAM76AQ8TAV0 307 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 ZNF483Q8TF39 744 aaPredicted RBP16.97■□□□□ 0.31
CHMP3-207ENST00000485465 NCSTNQ92542 709 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 MOCOSQ96EN8 888 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 OR2A14Q96R47 310 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 OR4K3Q96R72 315 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 MIPEPQ99797 713 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 GATA5Q9BWX5 397 aaPredicted RBP16.97■□□□□ 0.31
CHMP3-207ENST00000485465 PITPNM3Q9BZ71 974 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 RAB33BQ9H082 229 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 LRRN3Q9H3W5 708 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 ACSS2Q9NR19 701 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
CHMP3-207ENST00000485465 PCTPQ9UKL6 214 aa16.97■□□□□ 0.31
CHMP3-207ENST00000485465 SUPT7LO94864 414 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 RPLP0P05388 317 aaKnown RBP16.96■□□□□ 0.31
CHMP3-207ENST00000485465 FGF3P11487 239 aaPredicted RBP16.96■□□□□ 0.31
CHMP3-207ENST00000485465 UGT2B7P16662 529 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 PSMB5P28074 263 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 ACADVLP49748 655 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 GTF2H2Q13888 395 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 PDK4Q16654 411 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 CFAP157Q5JU67 520 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 GTF2H2CQ6P1K8 395 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 GOLGA7Q7Z5G4 137 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 TEX9Q8N6V9 391 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 OR6Y1Q8NGX8 325 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 NSUN5Q96P11 429 aaKnown RBP16.96■□□□□ 0.31
CHMP3-207ENST00000485465 HAUS8Q9BT25 410 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 ACAT2Q9BWD1 397 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 ABCG4Q9H172 646 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 EPHA6Q9UF33 1036 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 TAC3Q9UHF0 121 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 ANGPTL3Q9Y5C1 460 aa16.96■□□□□ 0.31
CHMP3-207ENST00000485465 A0A1W2PQM1 296 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 CASC3O15234 703 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 H2AFYO75367 372 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 NEFHP12036 1026 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 EPB42P16452 691 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 BGNP21810 368 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 PRDX3P30048 256 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 PIK3CGP48736 1102 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 NAA20P61599 178 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 PPP1CAP62136 330 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 CFHR1Q03591 330 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 PRDX1Q06830 199 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 CDC16Q13042 620 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 TRIP6Q15654 476 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 CHI3L2Q15782 390 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 SLC5A12Q1EHB4 618 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 ICE2Q659A1 982 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 IRGCQ6NXR0 463 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 WDR74Q6RFH5 385 aaPredicted RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 SPESP1Q6UW49 350 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 ZCCHC23Q6ZST2 131 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 USP53Q70EK8 1073 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 RPS27LQ71UM5 84 aaKnown RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 GLRX5Q86SX6 157 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 DEFB124Q8NES8 71 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 PPP1R14CQ8TAE6 165 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 ZDHHC12Q96GR4 267 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 GSTO2Q9H4Y5 243 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 GPRC5BQ9NZH0 403 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 POMT2Q9UKY4 750 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 DYRK1BQ9Y463 629 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 KCNE2Q9Y6J6 123 aa16.95■□□□□ 0.3
CHMP3-207ENST00000485465 EP300Q09472 2414 aaPredicted RBP16.95■□□□□ 0.3
CHMP3-207ENST00000485465 ASCC3Q8N3C0 2202 aaKnown RBP16.94■□□□□ 0.3
CHMP3-207ENST00000485465 ANKRD12Q6UB98 2062 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 TM4SF5O14894 197 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CAPN5O15484 640 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-207ENST00000485465 CCNDBP1O95273 360 aa16.94■□□□□ 0.3
CHMP3-207ENST00000485465 SERPINE1P05121 402 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms