RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 SMPDL3AQ92484 453 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 NSUN5Q96P11 429 aaKnown RBP13.64□□□□□ -0.23
SRSF6-202ENST00000483871 TMEM237Q96Q45 408 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 SGPP1Q9BX95 441 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 TWSG1Q9GZX9 223 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 CCDC177Q9NQR7 707 aaPredicted RBP13.64□□□□□ -0.23
SRSF6-202ENST00000483871 EVA1BQ9NVM1 165 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 OXSMQ9NWU1 459 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 KLHL3Q9UH77 587 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 TAC3Q9UHF0 121 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 SH2B3Q9UQQ2 575 aa13.64□□□□□ -0.23
SRSF6-202ENST00000483871 SPAARA0A1B0GVQ0 90 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 KIF1CO43896 1103 aaKnown RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 UGT2B7P16662 529 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 OAS2P29728 719 aaKnown RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CAPZBP47756 277 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 LSSP48449 732 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SERPINB4P48594 390 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 PRKAA2P54646 552 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CDH13P55290 713 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CLDN6P56747 220 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 GPS2Q13227 327 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SF1Q15637 639 aaKnown RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CAPN13Q6MZZ7 669 aaPredicted RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 KLHL35Q6PF15 583 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZNF574Q6ZN55 896 aaPredicted RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SLCO6A1Q86UG4 719 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 TCAIMQ8N3R3 496 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 RDH11Q8TC12 318 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 TGM7Q96PF1 710 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 MIPEPQ99797 713 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SLC32A1Q9H598 525 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 KLHL20Q9Y2M5 609 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 C2orf74A8MZ97 194 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 STX16-NPEPL1H3BU86 382 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 E2F3O00716 465 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 STX16O14662 325 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SLC30A4O14863 429 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 DUX1O43812 170 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 GP1BAP07359 652 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 BPGMP07738 259 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 TSPAN8P19075 237 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 NR1D1P20393 614 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 IMPDH1P20839 514 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SLC18A1P54219 525 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 NAGLUP54802 743 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 NFKB2Q00653 900 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 PCBP2Q15366 365 aaKnown RBP eCLIP13.63□□□□□ -0.239e-14■■■□□ 15.5
SRSF6-202ENST00000483871 RSPO4Q2I0M5 234 aaPredicted RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 UNC50Q53HI1 259 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SNAP47Q5SQN1 464 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 KIAA1614Q5VZ46 1190 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ARMC6Q6NXE6 501 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 TEX9Q8N6V9 391 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 MAP3K3Q99759 626 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 KLHL25Q9H0H3 589 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 ZBTB26Q9HCK0 441 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 NKIRAS1Q9NYS0 192 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CDV3Q9UKY7 258 aaKnown RBP13.63□□□□□ -0.23
SRSF6-202ENST00000483871 PCDHB11Q9Y5F2 797 aa13.63□□□□□ -0.23
SRSF6-202ENST00000483871 CEP250Q9BV73 2442 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 K7EPI3 171 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 AGRPO00253 132 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 NTN3O00634 580 aaPredicted RBP13.62□□□□□ -0.23
SRSF6-202ENST00000483871 PPP6CO00743 305 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 PRAMEF10O60809 474 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 SUPT7LO94864 414 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 PVRP15151 417 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 CHN1P15882 459 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 EPORP19235 508 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 CSRP1P21291 193 aaKnown RBP13.62□□□□□ -0.23
SRSF6-202ENST00000483871 CCR10P46092 362 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 HERVK_113P63132 956 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 KIR2DS3Q14952 304 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 PRAMEF13Q5VWM6 474 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 LIPMQ5VYY2 423 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 SPESP1Q6UW49 350 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 GLRX5Q86SX6 157 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 NUDCD3Q8IVD9 361 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 UBTD2Q8WUN7 234 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 GFM1Q96RP9 751 aaKnown RBP13.62□□□□□ -0.23
SRSF6-202ENST00000483871 GATA5Q9BWX5 397 aaPredicted RBP13.62□□□□□ -0.23
SRSF6-202ENST00000483871 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 CUEDC1Q9NWM3 386 aaPredicted RBP13.62□□□□□ -0.23
SRSF6-202ENST00000483871 OPTCQ9UBM4 332 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 MID2Q9UJV3 735 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 POMT2Q9UKY4 750 aa13.62□□□□□ -0.23
SRSF6-202ENST00000483871 TMCO1Q9UM00 188 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms