RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ADGRE2Q9UHX3 823 aa9.84□□□□□ -0.83
USP39-215ENST00000481409 SNX6Q9UNH7 406 aa9.84□□□□□ -0.83
USP39-215ENST00000481409 SLC22A14Q9Y267 594 aa9.84□□□□□ -0.83
USP39-215ENST00000481409 CACNA1EQ15878 2313 aa9.84□□□□□ -0.83
USP39-215ENST00000481409 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 H0YIV9 168 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 OR7A17O14581 309 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KHNYNO15037 678 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 NUDT21O43809 227 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 CRCPO75575 148 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KRT6AP02538 564 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KRT6BP04259 564 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 CHRNGP07510 517 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 RETP07949 1114 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 HGFP14210 728 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 NPPBP16860 134 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KRT6CP48668 564 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 INHBCP55103 352 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 CDH13P55290 713 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 BNC1Q01954 994 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 IRF8Q02556 426 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 RELAQ04206 551 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PRDX1Q06830 199 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 TRAF3Q13114 568 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PRKG2Q13237 762 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 C1orf61Q13536 156 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 TERF2Q15554 542 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 HIST2H2ACQ16777 129 aaPredicted RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 HLA-BQ31612 363 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 C14orf28Q4W4Y0 310 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PLA2G2CQ5R387 149 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 SH2D4BQ5SQS7 431 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 METTL21CQ5VZV1 264 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 CES4AQ5XG92 561 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KANK2Q63ZY3 851 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ATG9BQ674R7 924 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 HIST2H2AA3Q6FI13 130 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 GRHL2Q6ISB3 625 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 LAYNQ6UX15 382 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 MBOAT1Q6ZNC8 495 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 C17orf64Q86WR6 236 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 OOSP2Q86WS3 158 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PARP9Q8IXQ6 854 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KRT78Q8N1N4 520 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 TBC1D19Q8N5T2 526 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ZNF781Q8N8C0 355 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 SNX31Q8N9S9 440 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 SLC37A2Q8TED4 501 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 SAP25Q8TEE9 199 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ZNF473Q8WTR7 871 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 MED8Q96G25 268 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 METTL2AQ96IZ6 378 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 RAB33BQ9H082 229 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ACTR8Q9H981 624 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PELI2Q9HAT8 420 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ZDHHC2Q9UIJ5 367 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PPT2Q9UMR5 302 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 ICKQ9UPZ9 632 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PCDHGA11Q9Y5H2 935 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 KLK4Q9Y5K2 254 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 CFAP20Q9Y6A4 193 aaKnown RBP9.83□□□□□ -0.84
USP39-215ENST00000481409 USH1CQ9Y6N9 552 aa9.83□□□□□ -0.84
USP39-215ENST00000481409 PI4KAP42356 2102 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 PIPSLA2A3N6 862 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 FAM86C2PA6NEL3 165 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 C2orf74A8MZ97 194 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 B4DGG1 531 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 UBFD1O14562 309 aaKnown RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 PRICKLE3O43900 615 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 NOBOXO60393 691 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 LYPLA1O75608 230 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 WFS1O76024 890 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 EML2O95834 649 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 CELA2BP08218 269 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 CHRM5P08912 532 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 C1GALT1C1LP0DN25 315 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 HSD3B1P14060 373 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 JUPP14923 745 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GLB1P16278 677 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 HSD3B2P26439 372 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 CMPK1P30085 196 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 HMOX2P30519 316 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ARRB2P32121 409 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GDF5P43026 501 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 PHEXP78562 749 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 SLC14A1Q13336 389 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 BIRC2Q13490 618 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GPR18Q14330 331 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 NR1D2Q14995 579 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 PLCL1Q15111 1095 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 CLPPQ16740 277 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 SLC5A12Q1EHB4 618 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ZXDCQ2QGD7 858 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 SMU1Q2TAY7 513 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 THEMIS2Q5TEJ8 643 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 KANSL1Q7Z3B3 1105 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ZNF438Q7Z4V0 828 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 SPNS2Q8IVW8 549 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 CACNA2D3Q8IZS8 1091 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ARL14Q8N4G2 192 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms