RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ISL2Q96A47 359 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ZUFSPQ96AP4 578 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 OR6C1Q96RD1 312 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 DHRS4Q9BTZ2 278 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 EPB41L4BQ9H329 900 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 FANCEQ9HB96 536 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 SNX15Q9NRS6 342 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ARL15Q9NXU5 204 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 STOX2Q9P2F5 926 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 TLK1Q9UKI8 766 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 IKZF3Q9UKT9 509 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 ACOT9Q9Y305 439 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 OARD1Q9Y530 152 aa10.44□□□□□ -0.74
ATG4B-219ENST00000479941 DSPP15924 2871 aaKnown RBP10.44□□□□□ -0.74
ATG4B-219ENST00000479941 A0A087X1B8 175 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CCDC189A1A4V9 331 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 NPEPPSL1A6NEC2 478 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 TARM1B6A8C7 271 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CCNDBP1O95273 360 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 ALDOAP04075 364 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 C2P06681 752 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 ANXA5P08758 320 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 SNRPAP09012 282 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 LTA4HP09960 611 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PVRP15151 417 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FOLR1P15328 257 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 MAGP20916 626 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CMPK1P30085 196 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 ABATP80404 500 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PRDX1Q06830 199 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 TUBB3Q13509 450 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 TSTA3Q13630 321 aaPredicted RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CSHL1Q14406 222 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 KCNAB1Q14722 419 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 TSNQ15631 228 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FAM83EQ2M2I3 478 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 THEMIS2Q5TEJ8 643 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 AGTRAPQ6RW13 159 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 SUSD1Q6UWL2 747 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FRA10AC1Q70Z53 315 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 SPATA6LQ8N4H0 392 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PPFIBP2Q8ND30 876 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 ZNF248Q8NDW4 579 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 OR2L3Q8NG85 312 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 AENQ8WTP8 325 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FBXL8Q96CD0 374 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 MTBPQ96DY7 904 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CNTNAP3BQ96NU0 1288 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FCRL4Q96PJ5 515 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CTRCQ99895 268 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PARD6BQ9BYG5 372 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 KLHL25Q9H0H3 589 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PCBD2Q9H0N5 130 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 PPCSQ9HAB8 311 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 NMRAL1Q9HBL8 299 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 APMAPQ9HDC9 416 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 CCDC177Q9NQR7 707 aaPredicted RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 FGF21Q9NSA1 209 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 UTP6Q9NYH9 597 aaKnown RBP10.43□□□□□ -0.74
ATG4B-219ENST00000479941 ANKMY1Q9P2S6 941 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 TAC3Q9UHF0 121 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 RARRES3Q9UL19 164 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 KLK4Q9Y5K2 254 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 B3GALT1Q9Y5Z6 326 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 USP24Q9UPU5 2620 aa10.43□□□□□ -0.74
ATG4B-219ENST00000479941 URB1O60287 2271 aaKnown RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 CFAP47Q6ZTR5 3102 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 A0A096LPK6 155 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 IQANK1A0A1B0GTG1 560 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 STMND1H3BQB6 276 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 TLX3O43711 291 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 GUCA1CO95843 209 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 PSMB5P28074 263 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 GCAP28676 217 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 GRIA3P42263 894 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 MAGEA12P43365 314 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 HNMTP50135 292 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 TBPL1P62380 186 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 NAE1Q13564 534 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 TGFBIQ15582 683 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 GPR19Q15760 415 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 ZIC1Q15915 447 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 CDKL4Q5MAI5 379 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 KIAA1614Q5VZ46 1190 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 ICE2Q659A1 982 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 CAPN13Q6MZZ7 669 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 FIGLAQ6QHK4 219 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 MBOAT1Q6ZNC8 495 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 CDHR3Q6ZTQ4 885 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 FAM20CQ8IXL6 584 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 STAG3L4Q8TBR4 150 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 N4BP2L2Q92802 583 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 CAVIN3Q969G5 261 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 PMEPA1Q969W9 287 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 KIAA1191Q96A73 305 aa10.42□□□□□ -0.74
ATG4B-219ENST00000479941 ZNF501Q96CX3 271 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-219ENST00000479941 MED8Q96G25 268 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms