RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 CATSPEREQ5SY80 951 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 METTL21CQ5VZV1 264 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 LYSMD4Q5XG99 296 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 RAB42Q8N4Z0 105 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 LINC01555Q8NAE3 123 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 FAM46DQ8NEK8 389 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 ACTRT2Q8TDY3 377 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 LMX1AQ8TE12 382 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 SH3KBP1Q96B97 665 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 TUBGCP3Q96CW5 907 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 TMEM74BQ9NUR3 256 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 GPRC5BQ9NZH0 403 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 GIMAP2Q9UG22 337 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 ICKQ9UPZ9 632 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
APTX-223ENST00000479656 GON4LQ3T8J9 2241 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 THADAQ6YHU6 1953 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 A0A1B0GVT2 93 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 A0A1W2PPV9 198 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 ZNF839A8K0R7 811 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 MANBAO00462 879 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 PEX11AO75192 247 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 ULK1O75385 1050 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 CD22P20273 847 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 CCND1P24385 295 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 NDUFS1P28331 727 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 RAB28P51157 221 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 NEK2P51955 445 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 HNRNPH2P55795 449 aaKnown RBP10.84□□□□□ -0.67
APTX-223ENST00000479656 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
APTX-223ENST00000479656 SPRED3Q2MJR0 410 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 PLK5Q496M5 336 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 GGTA1PQ4G0N0 100 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 PRAMEF13Q5VWM6 474 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 LIPJQ5W064 366 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 LCTLQ6UWM7 567 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 SLCO4C1Q6ZQN7 724 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 Q6ZSR9 355 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 NAGSQ8N159 534 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 FBXL6Q8N531 539 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 OR4E2Q8NGC2 313 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 OR2T11Q8NH01 316 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 STON2Q8WXE9 905 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 SMPDL3AQ92484 453 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 MARK4Q96L34 752 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 CATSPER2Q96P56 530 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 FBXO4Q9UKT5 387 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 ZNF490Q9ULM2 529 aaPredicted RBP10.84□□□□□ -0.67
APTX-223ENST00000479656 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
APTX-223ENST00000479656 UGDHO60701 494 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 PDYNP01213 254 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 VIPP01282 170 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 C1GALT1C1LP0DN25 315 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 JUPP14923 745 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 XRCC1P18887 633 aaPredicted RBP10.83□□□□□ -0.68
APTX-223ENST00000479656 PSMB5P28074 263 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 PKLRP30613 574 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 PCDH1Q08174 1060 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 ELOCQ15369 112 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 C11orf74Q86VG3 221 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 TRIM48Q8IWZ4 208 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 OR2L8Q8NGY9 312 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SLC5A11Q8WWX8 675 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SLC29A3Q9BZD2 475 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SLC40A1Q9NP59 571 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 PFDN4Q9NQP4 134 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SNX6Q9UNH7 406 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 FANCMQ8IYD8 2048 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 TDRD6O60522 2096 aaKnown RBP10.83□□□□□ -0.68
APTX-223ENST00000479656 A0A1B0GTW7 788 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 OR5K4A6NMS3 321 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 PRR5-ARHGAP8B1AHC4 643 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 UBDO15205 165 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 YY2O15391 372 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SDC3O75056 442 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 KIAA0754O94854 1291 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 KRT6AP02538 564 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 KRT6BP04259 564 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 AVPR2P30518 371 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 CASP2P42575 452 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 KRT6CP48668 564 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 HNRNPKP61978 463 aaKnown RBP eCLIP10.83□□□□□ -0.68
APTX-223ENST00000479656 BNIP1Q12981 228 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 TEAD4Q15561 434 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 XKR7Q5GH72 579 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 AMIGO1Q86WK6 493 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 TREML1Q86YW5 311 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 RNF175Q8N4F7 328 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 CHCHD4Q8N4Q1 142 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms