RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FPR2P25090 351 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 FOXN2P32314 431 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 STX2P32856 288 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A3P35503 534 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A5P35504 534 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 NSG1P42857 185 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 MAGEA4P43358 317 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GNPDA1P46926 289 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 RXRGP48443 463 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 HK3P52790 923 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 IRX4P78413 519 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 XIAPP98170 497 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM115Q12893 351 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ILF3Q12906 894 aaKnown RBP eCLIP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 FZD2Q14332 565 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ELOCQ15369 112 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ADRM1Q16186 407 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 INSCQ1MX18 579 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 KIF19Q2TAC6 998 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 HLA-BQ31612 363 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GPRC6AQ5T6X5 926 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 THEMIS2Q5TEJ8 643 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GKAP1Q5VSY0 366 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CES3Q6UWW8 571 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 LAYNQ6UX15 382 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 MARK2Q7KZI7 788 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 RD3Q7Z3Z2 195 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM135Q86UB9 458 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SLCO6A1Q86UG4 719 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 LRRTM4Q86VH4 590 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 KCNMB4Q86W47 210 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SERPINA9Q86WD7 417 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 LRRC6Q86X45 466 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GKN2Q86XP6 184 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TRAPPC5Q8IUR0 188 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CACNA2D3Q8IZS8 1091 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 RBFAQ8N0V3 343 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 NXPE1Q8N323 547 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 FSTL5Q8N475 847 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 MINDY1Q8N5J2 469 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CISD2Q8N5K1 135 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ANKS4BQ8N8V4 417 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 DDHD1Q8NEL9 900 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GSDMBQ8TAX9 411 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CCT6BQ92526 530 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 FAM122AQ96E09 287 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CERS2Q96G23 380 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF778Q96MU6 729 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 OR2M4Q96R27 311 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 AGAP2Q99490 1192 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GSDMCQ9BYG8 508 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CLPBQ9H078 707 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 OR2AG1Q9H205 316 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SMOC1Q9H4F8 434 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 FAM96AQ9H5X1 160 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 CNOT10Q9H9A5 744 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A7Q9HAW7 530 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A10Q9HAW8 530 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 UGT1A8Q9HAW9 530 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TREX1Q9NSU2 369 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 INTS10Q9NVR2 710 aaKnown RBP6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TXNDC16Q9P2K2 825 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 ZNHIT2Q9UHR6 403 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 GNPTGQ9UJJ9 305 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 NFU1Q9UMS0 254 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 SLC17A4Q9Y2C5 497 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TEX264Q9Y6I9 313 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM131Q92545 1883 aa6.06□□□□□ -1.44
SF3B1-209ENST00000479532 PI4KAP42356 2102 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TRBV5-4A0A0C4DH59 114 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 A0A1B0GTQ1 180 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 UBA6A0AVT1 1052 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 LNP1A1A4G5 178 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GMNCA6NCL1 334 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM202A6NGA9 273 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 OR51F1A6NGY5 319 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 AGAP14A8MT82 685 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ANKRD65E5RJM6 399 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 H3BMM5 538 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GAPDHSO14556 408 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 KPNA5O15131 536 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 AQP9O43315 295 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 GRID2O43424 1007 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 BRINP1O60477 761 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 BANF1O75531 89 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 AP2A2O94973 939 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 FTH1P02794 183 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 EIF2S1P05198 315 aaKnown RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ANXA6P08133 673 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZGLP1P0C6A0 271 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF883P0CG24 379 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SLC2A4P14672 509 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF8P17098 575 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-209ENST00000479532 NR1D1P20393 614 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 SDHBP21912 280 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 CALB2P22676 271 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 RANBP1P43487 201 aa6.05□□□□□ -1.44
SF3B1-209ENST00000479532 KIR2DL2P43627 348 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms