RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 STAT5AP42229 794 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 Q6ZVL8 140 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 ADGRG6Q86SQ4 1221 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 OR14C36Q8NHC7 312 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 SUN5Q8TC36 379 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 ANKRD49Q8WVL7 239 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 SEC14L3Q9UDX4 400 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 EMCNQ9ULC0 261 aa14□□□□□ -0.17
COL20A1-206ENST00000479501 KLHL33A6NCF5 533 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 UPK3BL1B0FP48 263 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 UPK3BL2E5RIL1 263 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 CTSKP43235 329 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 ZBED5Q49AG3 693 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 SPANXN4Q5MJ08 99 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 AHSA2Q719I0 299 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 KRT74Q7RTS7 529 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 ERMP1Q7Z2K6 904 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 FBXO27Q8NI29 283 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 EXOSC8Q96B26 276 aaKnown RBP13.99□□□□□ -0.17
COL20A1-206ENST00000479501 CD244Q9BZW8 370 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 SLC28A3Q9HAS3 691 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 PTGFRNQ9P2B2 879 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 IL36AQ9UHA7 158 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 LYVE1Q9Y5Y7 322 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 TMEM189-UBE2V1I3L0A0 370 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 FYNP06241 537 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 PSMA3P25788 255 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 HNF1BP35680 557 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 RAB25P57735 213 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 DAG1Q14118 895 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 TEAD4Q15561 434 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 ATAT1Q5SQI0 421 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 SORT1Q99523 831 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 GULP1Q9UBP9 304 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF780BQ9Y6R6 833 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 S100A9P06702 114 aaKnown RBP13.99□□□□□ -0.17
COL20A1-206ENST00000479501 DDX6P26196 483 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL20A1-206ENST00000479501 CLCN4P51793 760 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 XKR4Q5GH76 650 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 AMZ2Q86W34 360 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 SCAIQ8N9R8 606 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 OR52J3Q8NH60 311 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
COL20A1-206ENST00000479501 C11orf49Q9H6J7 331 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 ITM2CQ9NQX7 267 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 GJD2Q9UKL4 321 aa13.99□□□□□ -0.17
COL20A1-206ENST00000479501 GSAPA4D1B5 854 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 CLIC1O00299 241 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 TBX1O43435 398 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 AIREO43918 545 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 NDUFS2O75306 463 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PRKD3O94806 890 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 OR6B1O95007 311 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 HMGCLP35914 325 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 LMAN2Q12907 356 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 TEAD2Q15562 447 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 OR4F3Q6IEY1 312 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 CHST15Q7LFX5 561 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SLC34A3Q8N130 599 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SLC22A17Q8WUG5 538 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PRICKLE1Q96MT3 831 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SP140LQ9H930 580 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 MOV10Q9HCE1 1003 aaKnown RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 WDR37Q9Y2I8 494 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 DNAJC15Q9Y5T4 150 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 ADAMDEC1O15204 470 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PCDH7O60245 1069 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 NOBOXO60393 691 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 CCNIQ14094 377 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 HEPACAMQ14CZ8 416 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 C5orf22Q49AR2 442 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 OR10G6Q8NH81 332 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF296Q8WUU4 475 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 CHCHD6Q9BRQ6 235 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 LIN28AQ9H9Z2 209 aaKnown RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SEMA3GQ9NS98 782 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 WASH4PA8MWX3 477 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 J3QRK9 145 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 AP3D1O14617 1153 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 GRID2O43424 1007 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 IFNW1P05000 195 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 ENO2P09104 434 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 AZGP1P25311 298 aaKnown RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 STK19P49842 368 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 OR4D1Q15615 310 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PTCHD4Q6ZW05 846 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SYVN1Q86TM6 617 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 ZBTB8BQ8NAP8 495 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 SRFBP1Q8NEF9 429 aaKnown RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 C17orf50Q8WW18 174 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 FBXL8Q96CD0 374 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PHIPQ8WWQ0 1821 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 K7ERQ8 282 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 OR1F1O43749 312 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 AMD1P17707 334 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms