RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PFDN4Q9NQP4 134 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TCP11L1Q9NUJ3 509 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMOD3Q9NYL9 352 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 KLHL9Q9P2J3 617 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 DLGAP4Q9Y2H0 992 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 GRIP1Q9Y3R0 1128 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 CEMIPQ8WUJ3 1361 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TAF1P21675 1872 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 MYH13Q9UKX3 1938 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM170AA1A519 330 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMEM221A6NGB7 291 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 C15orf62A8K5M9 175 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMEM178BH3BS89 294 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 CCER2I3L3R5 266 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TULP2O00295 520 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 PTGESO14684 152 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 CELF2O95319 508 aaKnown RBP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SERPINB2P05120 415 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF23P17027 643 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ACHEP22303 614 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 DGKAP23743 735 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 GABRA5P31644 462 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 MTHFRP42898 656 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TNNT2P45379 298 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF75DP51815 510 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 CD81P60033 236 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 HNRNPKP61978 463 aaKnown RBP eCLIP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 RBP5P82980 135 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 PLIN5Q00G26 463 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLC20A2Q08357 652 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 PNRC1Q12796 327 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ILF3Q12906 894 aaKnown RBP eCLIP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF273Q14593 569 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 KLHL26Q53HC5 615 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 GCNT6Q5T4J0 391 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 C1QTNF12Q5T7M4 302 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TRAT1Q6PIZ9 186 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 DCLRE1AQ6PJP8 1040 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SUSD1Q6UWL2 747 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 UNQ6126/PRO20091Q6UXV3 157 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ASB18Q6ZVZ8 466 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 PLEKHM3Q6ZWE6 761 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SATL1Q86VE3 508 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ODF3L1Q8IXM7 274 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 MAB21L3Q8N8X9 362 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 CAMKVQ8NCB2 501 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM162AQ96A26 154 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLAMF9Q96A28 289 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 NXNL1Q96CM4 212 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 CDCA5Q96FF9 252 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM81BQ96LP2 452 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SPAG5Q96R06 1193 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 NEURL2Q9BR09 285 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 SEMA6AQ9H2E6 1030 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 LRMDAQ9H2I8 198 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 DPAGT1Q9H3H5 408 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 UBTD1Q9HAC8 227 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 KLHL1Q9NR64 748 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 RHCGQ9UBD6 479 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 VDAC3Q9Y277 283 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 LIPGQ9Y5X9 500 aa3.82□□□□□ -1.8
CDC42BPA-212ENST00000478573 TRPM7Q96QT4 1865 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SCN4AP35499 1836 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 ECM29Q5VYK3 1845 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 WDR90Q96KV7 1748 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PXDNLA1KZ92 1463 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SOS1Q07889 1333 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PRSS51A0A1B0GVH4 220 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 A0A1W2PPQ1 181 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 EIF3DO15371 548 aaKnown RBP eCLIP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNHIT1O43257 154 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 XRCC3O43542 346 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GPR137BO60478 399 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 WDR1O75083 606 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SIX3O95343 332 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR2T7P0C7T2 308 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 HLA-DOBP13765 273 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 FDPSP14324 419 aaKnown RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PPP2R1AP30153 589 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GNL1P36915 607 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 RELQ04864 619 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PRKCZQ05513 592 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PPIGQ13427 754 aaKnown RBP eCLIP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GRTP1Q5TC63 336 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 ADAM5Q6NVV9 412 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 LINGO4Q6UY18 593 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GDPD4Q6W3E5 623 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM47EQ6ZV65 393 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 GLRX5Q86SX6 157 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 METTL23Q86XA0 190 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 KMT5CQ86Y97 462 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms