RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SLC35D3Q5M8T2 416 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 FAM182AQ5T1J6 154 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 FIGLAQ6QHK4 219 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 OR4N5Q8IXE1 308 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 TEX11Q8IYF3 940 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 C9orf43Q8TAL5 461 aaPredicted RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 SRSF8Q9BRL6 282 aaKnown RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 NYXQ9GZU5 481 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 MIS12Q9H081 205 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 SH2D4AQ9H788 454 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 UBN1Q9NPG3 1134 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 WSB2Q9NYS7 404 aaPredicted RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 LUZP4Q9P127 313 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 LARSQ9P2J5 1176 aaKnown RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 PDP2Q9P2J9 529 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 C19orf25Q9UFG5 118 aaPredicted RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 SLC6A5Q9Y345 797 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 SNURFLB1AK76 121 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 NPIPB9F8W1W9 429 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 TEX28O15482 410 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 MED24O75448 989 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 OR2C1O95371 312 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 RARGP13631 454 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 ATP1A3P13637 1013 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 JAK1P23458 1154 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 GABRA5P31644 462 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 CSTF2P33240 577 aaKnown RBP eCLIP2.26□□□□□ -2.05
HPS3-205ENST00000478525 SUOXP51687 545 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 CDK3Q00526 305 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 NR1D2Q14995 579 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 GARNL3Q5VVW2 1013 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 KLHL35Q6PF15 583 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 PDILTQ8N807 584 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 SLC37A3Q8NCC5 494 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 POMGNT1Q8WZA1 660 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 C2orf48Q96LS8 159 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 LPAR4Q99677 370 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 JPT2Q9H910 190 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 GKN1Q9NS71 199 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 TRIM17Q9Y577 477 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 PIAS3Q9Y6X2 628 aa2.26□□□□□ -2.05
HPS3-205ENST00000478525 FRMD3A2A2Y4 597 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 CDX4O14627 284 aaPredicted RBP2.25□□□□□ -2.05
HPS3-205ENST00000478525 NXPH4O95158 308 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 HSPA1AP0DMV8 641 aaKnown RBP2.25□□□□□ -2.05
HPS3-205ENST00000478525 HSPA1BP0DMV9 641 aaKnown RBP2.25□□□□□ -2.05
HPS3-205ENST00000478525 PTPN3P26045 913 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 ATP4BP51164 291 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 TMEM132DQ14C87 1099 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 ZNF79Q15937 498 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 NUDT13Q86X67 352 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 RNF130Q86XS8 419 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 CCDC185Q8N715 623 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 OR5T2Q8NGG2 359 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 DHX58Q96C10 678 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 C4orf45Q96LM5 186 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 CMTM3Q96MX0 182 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 TEX13BQ9BXU2 312 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 MUC13Q9H3R2 512 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 MTHFD2LQ9H903 347 aaPredicted RBP2.25□□□□□ -2.05
HPS3-205ENST00000478525 JMJD4Q9H9V9 463 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 TBC1D17Q9HA65 648 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 ABCD2Q9UBJ2 740 aa2.25□□□□□ -2.05
HPS3-205ENST00000478525 CORO1CQ9ULV4 474 aaPredicted RBP2.25□□□□□ -2.05
HPS3-205ENST00000478525 LNP1A1A4G5 178 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 OGTO15294 1046 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 PRDM1O75626 825 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 PRKAR1AP10644 381 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 ATP6V1B1P15313 513 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 PSMA4P25789 261 aaKnown RBP2.24□□□□□ -2.05
HPS3-205ENST00000478525 PTGER4P35408 488 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 PPARGP37231 505 aaPredicted RBP2.24□□□□□ -2.05
HPS3-205ENST00000478525 DHODHQ02127 395 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 ITGA7Q13683 1181 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 RUNX3Q13761 415 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 CA9Q16790 459 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 C2orf83Q53S99 150 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 NHLRC1Q6VVB1 395 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 PXKQ7Z7A4 578 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 POC5Q8NA72 575 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 NSMAFQ92636 917 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 BADQ92934 168 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 FAM20AQ96MK3 541 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 ZNF581Q9P0T4 197 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 LNPEPQ9UIQ6 1025 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 HACL1Q9UJ83 578 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
HPS3-205ENST00000478525 ANKUB1A6NFN9 424 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 KRTAP4-16G5E9R7 235 aaPredicted RBP2.23□□□□□ -2.05
HPS3-205ENST00000478525 RTN3O95197 1032 aaPredicted RBP2.23□□□□□ -2.05
HPS3-205ENST00000478525 RB1P06400 928 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 VPREB1P12018 145 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 PRAMEP78395 509 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 TMF1P82094 1093 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 FKBP3Q00688 224 aaKnown RBP2.23□□□□□ -2.05
HPS3-205ENST00000478525 ZNF146Q15072 292 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 ATAD3CQ5T2N8 411 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 TMEM154Q6P9G4 183 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 TMCO3Q6UWJ1 677 aa2.23□□□□□ -2.05
HPS3-205ENST00000478525 C3P1Q6ZMU1 363 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms