RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CATSPERZQ9NTU4 200 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 INTS7Q9NVH2 962 aaKnown RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 CTSFQ9UBX1 484 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 SLC39A10Q9ULF5 831 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 NOVA2Q9UNW9 492 aaKnown RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 KLK4Q9Y5K2 254 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 A0A1W2PPV9 198 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 NRP2O60462 931 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 FKBP9O95302 570 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 C1orf105O95561 183 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 APRTP07741 180 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 ZSCAN5DPP0CG00 497 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 PSMB5P28074 263 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 DCTP40126 519 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 TTPAP49638 278 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 YBX1P67809 324 aaKnown RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 Q0VFX4 171 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 SNX1Q13596 522 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 SIX1Q15475 284 aaPredicted RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 AARS2Q5JTZ9 985 aaKnown RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 PCID2Q5JVF3 399 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 WASHC2DQ5SRD0 308 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 FRMPD2BQ6IN97 320 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 KCNMB4Q86W47 210 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 PARP9Q8IXQ6 854 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 METTL27Q8N6F8 245 aaPredicted RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 PPHLN1Q8NEY8 458 aaKnown RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 OR11G2Q8NGC1 345 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 OR2A1Q8NGT9 310 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 PPP4R1Q8TF05 950 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 RAD51AP1Q96B01 352 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 SELENOSQ9BQE4 189 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 MRM3Q9HC36 420 aaKnown RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 ANAPC5Q9UJX4 755 aa15.98■□□□□ 0.15
TRIM13-208ENST00000478111 RUVBL2Q9Y230 463 aaKnown RBP15.98■□□□□ 0.15
TRIM13-208ENST00000478111 LOC105369274A0A096LPK9 316 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 LOC102723532A0A0G2JNH3 316 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 SRPX2O60687 465 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 RPS3P23396 243 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 RPL22P35268 128 aaKnown RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 BDKRB1P46663 353 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 VSX2P58304 361 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 CRADDP78560 199 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 FAM214AQ32MH5 1076 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 AGAP7PQ5VUJ5 663 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 OR4N4Q8N0Y3 316 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 RNF10Q8N5U6 811 aaKnown RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 TTC29Q8NA56 475 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 ST6GALNAC3Q8NDV1 305 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 OR2L3Q8NG85 312 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 C5orf34Q96MH7 638 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 AGAP4Q96P64 663 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 RAB11FIP5Q9BXF6 653 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 SEMA3GQ9NS98 782 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 PAK5Q9P286 719 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 NXT1Q9UKK6 140 aaKnown RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 TTC7AQ9ULT0 858 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-208ENST00000478111 MAU2Q9Y6X3 613 aa15.97■□□□□ 0.15
TRIM13-208ENST00000478111 HYKKA2RU49 373 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 E2F3O00716 465 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 ARNTP27540 789 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 NMBRP28336 390 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 TSFMP43897 325 aaKnown RBP15.96■□□□□ 0.15
TRIM13-208ENST00000478111 SESN2P58004 480 aaPredicted RBP15.96■□□□□ 0.15
TRIM13-208ENST00000478111 TMED2Q15363 201 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 TUBB8Q3ZCM7 444 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 CTSL3PQ5NE16 218 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 SEL1L2Q5TEA6 688 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 PTRHD1Q6GMV3 140 aaKnown RBP15.96■□□□□ 0.15
TRIM13-208ENST00000478111 DNAJB14Q8TBM8 379 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 BIRC8Q96P09 236 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 PANX3Q96QZ0 392 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 MIPEPQ99797 713 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 LHPPQ9H008 270 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 IL1RAPL1Q9NZN1 696 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 GNPTGQ9UJJ9 305 aa15.96■□□□□ 0.15
TRIM13-208ENST00000478111 MYO7BQ6PIF6 2116 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 A0A0J9YVX5 310 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 KLHL18O94889 574 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 KLC1Q07866 573 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 ELOAQ14241 798 aaKnown RBP15.95■□□□□ 0.14
TRIM13-208ENST00000478111 FASTKQ14296 549 aaKnown RBP15.95■□□□□ 0.14
TRIM13-208ENST00000478111 GBX1Q14549 363 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 RBBP7Q16576 425 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 ATG9BQ674R7 924 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 FBXO42Q6P3S6 717 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 TTC23LQ6PF05 361 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 RNF44Q7L0R7 432 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 OTOAQ7RTW8 1153 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 LRRC6Q86X45 466 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 TXLNBQ8N3L3 684 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 MPP5Q8N3R9 675 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 STT3BQ8TCJ2 826 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 GRHL3Q8TE85 626 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 SYNPO2LQ9H987 977 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 ZNF304Q9HCX3 659 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 EIF2B3Q9NR50 452 aaKnown RBP15.95■□□□□ 0.14
TRIM13-208ENST00000478111 AGPAT4Q9NRZ5 378 aa15.95■□□□□ 0.14
TRIM13-208ENST00000478111 STOX2Q9P2F5 926 aaPredicted RBP15.95■□□□□ 0.14
TRIM13-208ENST00000478111 ZC3H7BQ9UGR2 993 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms