RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ASB1Q9Y576 335 aa19.25■□□□□ 0.67
ACTB-210ENST00000477812 SNRNP200O75643 2136 aaKnown RBP19.24■□□□□ 0.67
ACTB-210ENST00000477812 TLCD2A6NGC4 264 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 SPAG7O75391 227 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 ANKRD34CP0C6C1 535 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 MPSTP25325 297 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 CCKBRP32239 447 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 AGTR2P50052 363 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 NFKB2Q00653 900 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 SETDB1Q15047 1291 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 SLC5A12Q1EHB4 618 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 AGBL2Q5U5Z8 902 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 FAM92BQ6ZTR7 304 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 RAB44Q7Z6P3 723 aaPredicted RBP19.24■□□□□ 0.67
ACTB-210ENST00000477812 TRIM73Q86UV7 250 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 CACTIN-AS1Q8N1I8 211 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 DCBLD1Q8N8Z6 715 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 OR2L3Q8NG85 312 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 SLC22A18Q96BI1 424 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 PYCR2Q96C36 320 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 INTS7Q9NVH2 962 aaKnown RBP19.24■□□□□ 0.67
ACTB-210ENST00000477812 SPTBN2O15020 2390 aa19.24■□□□□ 0.67
ACTB-210ENST00000477812 ISM1B1AKI9 464 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 G3V2L1 256 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 TOX3O15405 576 aaPredicted RBP19.23■□□□□ 0.67
ACTB-210ENST00000477812 IPO13O94829 963 aaKnown RBP19.23■□□□□ 0.67
ACTB-210ENST00000477812 MT-CO3P00414 261 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 CCND1P24385 295 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 ALDH18A1P54886 795 aaKnown RBP19.23■□□□□ 0.67
ACTB-210ENST00000477812 YBX1P67809 324 aaKnown RBP19.23■□□□□ 0.67
ACTB-210ENST00000477812 PFKFB4Q16877 469 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 ISXQ2M1V0 245 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 CCDC153Q494R4 210 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 TTMPQ5BVD1 217 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 FBXO48Q5FWF7 155 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 PRAMEF13Q5VWM6 474 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 CAPN13Q6MZZ7 669 aaPredicted RBP19.23■□□□□ 0.67
ACTB-210ENST00000477812 ARHGAP22Q7Z5H3 698 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 FAM20CQ8IXL6 584 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 CARFQ8N187 725 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 MED8Q96G25 268 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 CCDC74BQ96LY2 380 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 MAP3K3Q99759 626 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 WWOXQ9NZC7 414 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 SLC17A7Q9P2U7 560 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 TAC3Q9UHF0 121 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 TMCO1Q9UM00 188 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 SH2B3Q9UQQ2 575 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 PCDHB11Q9Y5F2 797 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 KLK4Q9Y5K2 254 aa19.23■□□□□ 0.67
ACTB-210ENST00000477812 IGHV5-51A0A0C4DH38 117 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 IGKV1-8A0A0C4DH67 115 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 A0A0J9YY10 115 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 A8MT66 165 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 STX16-NPEPL1H3BU86 382 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 DYNC1I1O14576 645 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 STX16O14662 325 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 DLX3O60479 287 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 FKBP9O95302 570 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 S100BP04271 92 aaPredicted RBP19.22■□□□□ 0.67
ACTB-210ENST00000477812 GFAPP14136 432 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 NPPBP16860 134 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 RPA3P35244 121 aaPredicted RBP19.22■□□□□ 0.67
ACTB-210ENST00000477812 GDF5P43026 501 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 HSPA7P48741 367 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 PPM1FP49593 454 aaPredicted RBP19.22■□□□□ 0.67
ACTB-210ENST00000477812 TRA2AQ13595 282 aaKnown RBP eCLIP19.22■□□□□ 0.67
ACTB-210ENST00000477812 MPP2Q14168 576 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 KIAA1614Q5VZ46 1190 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 ICE2Q659A1 982 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 ZYG11AQ6WRX3 759 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 FBXO39Q8N4B4 442 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 PTGR2Q8N8N7 351 aaPredicted RBP19.22■□□□□ 0.67
ACTB-210ENST00000477812 TCP10LQ8TDR4 215 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 KLHL6Q8WZ60 621 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 ESAMQ96AP7 390 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 PKNOX2Q96KN3 472 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 MIPEPQ99797 713 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 ACAT2Q9BWD1 397 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 ZMYND15Q9H091 742 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 PCBD2Q9H0N5 130 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 CNOT10Q9H9A5 744 aaKnown RBP19.22■□□□□ 0.67
ACTB-210ENST00000477812 SLC6A20Q9NP91 592 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 C1GALT1Q9NS00 363 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 KLHL3Q9UH77 587 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 CLCA2Q9UQC9 943 aa19.22■□□□□ 0.67
ACTB-210ENST00000477812 LRRC14BA6NHZ5 514 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 PRPF4O43172 522 aaKnown RBP eCLIP19.21■□□□□ 0.672e-11■■■□□ 17.4
ACTB-210ENST00000477812 CSO75390 466 aaKnown RBP19.21■□□□□ 0.67
ACTB-210ENST00000477812 PVRP15151 417 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ST6GAL1P15907 406 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ETV4P43268 484 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ID4P47928 161 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 INHBCP55103 352 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 MAGOHP61326 146 aaKnown RBP19.21■□□□□ 0.67
ACTB-210ENST00000477812 PRDX1Q06830 199 aaKnown RBP19.21■□□□□ 0.67
ACTB-210ENST00000477812 PCBP2Q15366 365 aaKnown RBP eCLIP19.21■□□□□ 0.671e-10■■□□□ 14.1
ACTB-210ENST00000477812 SF1Q15637 639 aaKnown RBP19.21■□□□□ 0.67
ACTB-210ENST00000477812 LCTLQ6UWM7 567 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 THOC6Q86W42 341 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms