RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 ACTR8Q9H981 624 aa13.84□□□□□ -0.19
NELFCD-205ENST00000477741 CCDC177Q9NQR7 707 aaPredicted RBP13.84□□□□□ -0.19
NELFCD-205ENST00000477741 KCNK4Q9NYG8 393 aa13.84□□□□□ -0.19
NELFCD-205ENST00000477741 LNPEPQ9UIQ6 1025 aa13.84□□□□□ -0.19
NELFCD-205ENST00000477741 ARL2BPQ9Y2Y0 163 aa13.84□□□□□ -0.19
NELFCD-205ENST00000477741 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 TNFRSF10AO00220 468 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 CRCPO75575 148 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 GNSP15586 552 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 PKLRP30613 574 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 RAB28P51157 221 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 NEK2P51955 445 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 HNRNPKP61978 463 aaKnown RBP eCLIP13.83□□□□□ -0.2
NELFCD-205ENST00000477741 UBE2IP63279 158 aaKnown RBP13.83□□□□□ -0.2
NELFCD-205ENST00000477741 ELOCQ15369 112 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 TEAD4Q15561 434 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 SGO1Q5FBB7 561 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 TMPRSS11BQ86T26 416 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 GATAD2AQ86YP4 633 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 NTMT1Q9BV86 223 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 CUEDC1Q9NWM3 386 aaPredicted RBP13.83□□□□□ -0.2
NELFCD-205ENST00000477741 SPASTQ9UBP0 616 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 HEY2Q9UBP5 337 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 PI4KAP42356 2102 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 E9PBE3 544 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 BTN3A3O00478 584 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 SDHDO14521 159 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 CLGNO14967 610 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 KLHL41O60662 606 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 WFS1O76024 890 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 VIPP01282 170 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 GRIK2Q13002 908 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 DOC2AQ14183 400 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 ABRAXAS2Q15018 415 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 ZNF528Q3MIS6 628 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 XKR6Q5GH73 641 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 TMEM198Q66K66 360 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 C11orf74Q86VG3 221 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 TRIM48Q8IWZ4 208 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 OR2T11Q8NH01 316 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 SKA1Q96BD8 255 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 MARK4Q96L34 752 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 RILPQ96NA2 401 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 ELF4Q99607 663 aaPredicted RBP13.83□□□□□ -0.2
NELFCD-205ENST00000477741 POLG2Q9UHN1 485 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 G3BP2Q9UN86 482 aaKnown RBP13.83□□□□□ -0.2
NELFCD-205ENST00000477741 DOLKQ9UPQ8 538 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 COLEC10Q9Y6Z7 277 aa13.83□□□□□ -0.2
NELFCD-205ENST00000477741 KCNE1BA0A087WTH5 132 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 GIPC1O14908 333 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 CASC3O15234 703 aaKnown RBP13.82□□□□□ -0.2
NELFCD-205ENST00000477741 PPM1DO15297 605 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 NOBOXO60393 691 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 CLDN9O95484 217 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 GIMD1P0DJR0 217 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 UROSP10746 265 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 CD1EP15812 388 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
NELFCD-205ENST00000477741 PKNOX1P55347 436 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 IRF8Q02556 426 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 PLCL1Q15111 1095 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 LSM12Q3MHD2 195 aaKnown RBP13.82□□□□□ -0.2
NELFCD-205ENST00000477741 PRAMEF13Q5VWM6 474 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 TCEAL6Q6IPX3 200 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 METTL2BQ6P1Q9 378 aaKnown RBP13.82□□□□□ -0.2
NELFCD-205ENST00000477741 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
NELFCD-205ENST00000477741 ZNF740Q8NDX6 193 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 LCN9Q8WX39 176 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 TCEAL3Q969E4 200 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 SH3KBP1Q96B97 665 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 KLHL20Q9Y2M5 609 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 HEBP2Q9Y5Z4 205 aa13.82□□□□□ -0.2
NELFCD-205ENST00000477741 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
NELFCD-205ENST00000477741 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 EBLN1P0CF75 366 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 CDH1P12830 882 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 HGFP14210 728 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 HHEXQ03014 270 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 ARHGAP19Q14CB8 494 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 SLCO4C1Q6ZQN7 724 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 AMIGO1Q86WK6 493 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 GKN2Q86XP6 184 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 FITM2Q8N6M3 262 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 C19orf60Q96EN9 201 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 PPM1MQ96MI6 270 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 MIPEPQ99797 713 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 SPATA7Q9P0W8 599 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 KCNE2Q9Y6J6 123 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 GOLGA4Q13439 2230 aaKnown RBP13.81□□□□□ -0.2
NELFCD-205ENST00000477741 IGKV1-8A0A0C4DH67 115 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 PRR5-ARHGAP8B1AHC4 643 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 CNR2P34972 360 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 PPP1CAP62136 330 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 IFT88Q13099 833 aa13.81□□□□□ -0.2
NELFCD-205ENST00000477741 COL9A2Q14055 689 aaPredicted RBP13.81□□□□□ -0.2
NELFCD-205ENST00000477741 ZRSR2Q15696 482 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms