RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 COL28A1Q2UY09 1125 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 SUSD1Q6UWL2 747 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 DHRS13Q6UX07 377 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 USP53Q70EK8 1073 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 SLCO6A1Q86UG4 719 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 TCAIMQ8N3R3 496 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 FBXO39Q8N4B4 442 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 RHBDF1Q96CC6 855 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 TGM7Q96PF1 710 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 TMEM79Q9BSE2 394 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 ATG10Q9H0Y0 220 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 ABCF3Q9NUQ8 709 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 SPHK1Q9NYA1 384 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 TMEM9Q9P0T7 183 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 KLHL3Q9UH77 587 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 POMT2Q9UKY4 750 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 EMCNQ9ULC0 261 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 GRID1Q9ULK0 1009 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 ENTPD2Q9Y5L3 495 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 ACTL7BQ9Y614 415 aa14.81□□□□□ -0.04
SEC13-215ENST00000477547 ISM1B1AKI9 464 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 E7ENX8 843 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CAPN5O15484 640 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 SMIM24O75264 130 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 PROCP04070 461 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CDK4P11802 303 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 MTHFD2P13995 350 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CREB1P16220 341 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 RPA3P35244 121 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 KCNC1P48547 511 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 INSM1Q01101 510 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 TAP2Q03519 686 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CFHR1Q03591 330 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 NAE1Q13564 534 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 KIR2DS3Q14952 304 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CLPPQ16740 277 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 CDKL4Q5MAI5 379 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 THEMIS2Q5TEJ8 643 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 PRAMEF13Q5VWM6 474 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 SULT1C3Q6IMI6 304 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 WDR74Q6RFH5 385 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 RBM44Q6ZP01 1051 aaKnown RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 FAM92BQ6ZTR7 304 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 TRIM73Q86UV7 250 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 EXOC3L1Q86VI1 746 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 PLXDC1Q8IUK5 500 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 CCDC63Q8NA47 563 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 ZDHHC12Q96GR4 267 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 BBC3Q96PG8 261 aaPredicted RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 SH3GL2Q99962 352 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 RAB33BQ9H082 229 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 C12orf65Q9H3J6 166 aaKnown RBP14.8□□□□□ -0.04
SEC13-215ENST00000477547 TAC3Q9UHF0 121 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 MID2Q9UJV3 735 aa14.8□□□□□ -0.04
SEC13-215ENST00000477547 IGSF10Q6WRI0 2623 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 A0A1W2PPV9 198 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TLCD2A6NGC4 264 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 PLIN3O60664 434 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 IPO13O94829 963 aaKnown RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 DKK1O94907 266 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 SBK3P0C264 359 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TAC1P20366 129 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CCND1P24385 295 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 HSPA7P48741 367 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CLDN6P56747 220 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 MAGOHP61326 146 aaKnown RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 SETDB1Q15047 1291 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 PFKFB4Q16877 469 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 C18orf21Q32NC0 220 aaPredicted RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 PTCHD3Q3KNS1 767 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CCDC153Q494R4 210 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 SNAP47Q5SQN1 464 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 HES3Q5TGS1 186 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CAPN13Q6MZZ7 669 aaPredicted RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 SPESP1Q6UW49 350 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TMPRSS9Q7Z410 1059 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 LRRC56Q8IYG6 542 aaPredicted RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 PTGR2Q8N8N7 351 aaPredicted RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 OR4D9Q8NGE8 314 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 OR56A3Q8NH54 315 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 UBTD2Q8WUN7 234 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 SLC22A18Q96BI1 424 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 ARL8AQ96BM9 186 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 PYCR2Q96C36 320 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TLCD1Q96CP7 247 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 ATP6V1G3Q96LB4 118 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CD180Q99467 661 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 ACAT2Q9BWD1 397 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TWSG1Q9GZX9 223 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 CNOT10Q9H9A5 744 aaKnown RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 SSU72Q9NP77 194 aaKnown RBP14.79□□□□□ -0.04
SEC13-215ENST00000477547 EPHA6Q9UF33 1036 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 TMCO1Q9UM00 188 aa14.79□□□□□ -0.04
SEC13-215ENST00000477547 A0A0J9YY10 115 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 A8MT66 165 aa14.78□□□□□ -0.04
SEC13-215ENST00000477547 TYROBPO43914 113 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms